Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R30.974155-979713.04366.t

Possible name(s)

THNSL1; THNSL2

Gene model

Cisavi.CG.ENS81.R30.974155-979713

Location

R30 [974,154 / 979,713]

Sequences

Amino acid sequence

Length: 477

>Cisavi.CG.ENS81.R30.974155-979713.04366.p
MRFISTRGQTTEPKTFEESLFCCYTEDGGVLMPETIPKVDLMTLQKWKNLNYIALVKEIV
SFYVSSDEVTLQDQSDLIDAAFSSFDIDEVIQLAKLENGLNILELWHGKTLAFKDLAMSC
TAQFINYFLSKRGRHFTAVVVTSGDTGSSAIHNALDLPCIDIIVIFPHKRISKFQERMMT
TVLAKNIHVYAADGSNDDIENTVINVMNDGELVKKHPLLGTLNSQNWCRILVQESIAHSV
YAYLHATERVGAPVDIIIPCGGYGNMASCLIAKEMGVPINPVSVSNANDFMYRVVKTNEL
VLSKVQATIAPAMDIGFPLNSERVFWLLSGGNGQLIRELMEKFIETGHANLPADLHTKLV
KTVETSVASESAIIEAIQRCWKESNYPICPHTATAVAHYYGLTEGYKESENPAVHLATAS
AAKFSEALTKAGIPLQRSPKIDVLEKKKSQYTMLAKGDNWKKILREKIVEISCRANR

Nucleotide sequence

Length: 1,431

>Cisavi.CG.ENS81.R30.974155-979713.04366.t
ATGAGGTTTATAAGTACTAGGGGTCAGACGACGGAGCCTAAAACTTTTGAAGAAAGTCTG
TTTTGCTGCTACACTGAAGATGGCGGTGTGCTAATGCCGGAAACAATACCGAAAGTTGAT
TTGATGACTCTACAAAAGTGGAAAAATTTAAATTATATTGCCTTGGTGAAAGAAATCGTT
TCTTTTTATGTATCAAGCGATGAGGTTACACTACAGGACCAGTCAGACTTAATAGACGCT
GCTTTTTCTTCCTTTGATATCGACGAAGTAATACAGTTGGCCAAACTGGAAAATGGTCTT
AACATATTGGAGTTATGGCATGGAAAGACGTTGGCGTTTAAGGACCTGGCGATGTCGTGT
ACAGCTCAATTTATCAACTATTTTTTAAGCAAGCGGGGCCGCCATTTCACTGCAGTTGTT
GTGACATCGGGTGACACTGGCAGCAGTGCAATACACAACGCTCTTGACTTACCTTGTATT
GATATCATTGTGATATTCCCGCACAAACGTATCAGCAAATTTCAAGAACGGATGATGACA
ACGGTTCTTGCTAAAAACATTCATGTCTATGCAGCCGATGGATCCAACGATGATATTGAG
AACACGGTTATTAATGTTATGAACGATGGCGAGTTGGTAAAGAAGCACCCGTTATTGGGA
ACTTTAAATTCACAGAACTGGTGTAGAATTTTGGTGCAGGAAAGTATCGCGCACAGCGTA
TATGCATATCTACACGCCACTGAACGCGTGGGGGCACCAGTTGATATTATCATTCCATGT
GGTGGATATGGCAACATGGCATCATGCTTGATTGCTAAGGAAATGGGAGTTCCAATAAAT
CCTGTCAGCGTTTCTAACGCAAACGATTTTATGTACCGGGTGGTTAAAACGAACGAATTG
GTATTGTCGAAAGTACAAGCAACGATTGCCCCGGCTATGGACATCGGGTTCCCATTAAAT
AGTGAGCGCGTGTTTTGGTTGTTGTCCGGTGGAAATGGACAATTGATCAGGGAATTAATG
GAAAAGTTCATTGAGACTGGCCATGCAAATCTACCAGCTGATCTTCATACAAAGCTTGTG
AAAACAGTTGAAACATCGGTTGCAAGCGAGTCGGCTATTATAGAAGCAATACAACGCTGT
TGGAAGGAAAGCAATTATCCCATTTGCCCCCACACCGCCACCGCCGTCGCTCATTATTAC
GGGTTAACAGAAGGATACAAAGAGTCAGAAAACCCAGCAGTTCATTTGGCAACTGCATCG
GCTGCAAAGTTTAGTGAGGCGCTAACCAAGGCTGGGATTCCACTGCAAAGATCGCCAAAG
ATTGACGTTTTGGAGAAGAAAAAATCACAATACACAATGTTGGCAAAGGGCGATAACTGG
AAGAAGATTTTAAGGGAAAAAATTGTTGAAATCTCTTGTCGTGCAAATCGA

InterProScan

Gene3D	Thr_synth_N_sf (IPR037158) - T[1-88] 8.8E-19
SUPERFAMILY	Trypto_synt_PLP_dependent (IPR036052) - T[1-451] 6.22E-109
Pfam	Thr_synth_N (IPR029144) - T[2-82] 3.8E-16
Pfam	PLP-dep (IPR001926) - T[106-409] 2.6E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
THNS2_HUMAN	44.561 %	415	6.78E-142
THNS1_HUMAN	26.856 %	154	2.36E-40