- Region 'REG00001546' >
- Transcript 'Cisavi.CG.ENS81.R30....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R30.1443228-1444322.05911.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
R30 [1,443,227 / 1,444,322]
Amino acid sequence
Length: 298
>Cisavi.CG.ENS81.R30.1443228-1444322.05911.p
MMLHHGGVNRLRCSKVKDRHLAATWSERASVHIWDLTRPVGAVTEPSSAAGFIAEQKKHP
VIPTFTFAGHMDEGFAIDWSPSGNGQLLTGDCKSNIHLWKPREDGTWNVDQRPYAAHSAS
VEEVQWSPNERSVFASCSVDKTIRIWDTRANHLKACMLTTKAHDADVNVMNWNKNDPFIA
SGGDDGVIKVWDLRQFNKGKAIATFKHHTAPITSVEWHPTDKSIFAACGADDQLTQWDLA
VEVDDTSSDENVKEVPPQLLFIHQGQKDTKELHWHPQIPGLIISTALDGFNVFKTISV
Nucleotide sequence
Length: 1,056
>Cisavi.CG.ENS81.R30.1443228-1444322.05911.t
CGATGATGTTGCATCATGGAGGAGTGAACAGATTAAGATGTTCGAAAGTGAAAGATCGAC
ATCTCGCAGCAACTTGGTCAGAACGTGCTTCCGTGCACATATGGGATCTCACTCGGCCTG
TTGGTGCAGTGACTGAGCCATCGAGTGCAGCAGGTTTTATAGCAGAGCAGAAGAAACACC
CGGTAATACCTACATTCACATTTGCTGGTCACATGGATGAGGGCTTTGCAATCGACTGGT
CACCTTCTGGTAACGGTCAGCTGCTAACTGGTGATTGCAAGAGCAATATCCACTTATGGA
AGCCGCGAGAAGACGGGACGTGGAATGTGGATCAACGACCTTACGCTGCGCACTCAGCAT
CAGTAGAAGAAGTTCAATGGTCGCCAAATGAACGGAGCGTTTTTGCCTCCTGCTCTGTGG
ACAAGACTATTCGAATCTGGGACACACGTGCAAATCATTTGAAAGCATGCATGTTAACAA
CAAAAGCTCACGATGCTGATGTTAACGTCATGAATTGGAATAAAAACGATCCTTTCATAG
CATCAGGTGGGGATGATGGGGTTATAAAGGTGTGGGATCTGCGCCAGTTTAATAAAGGCA
AAGCAATCGCAACCTTTAAACATCACACTGCTCCGATCACATCAGTGGAATGGCATCCGA
CTGATAAAAGTATTTTTGCGGCATGTGGAGCCGATGATCAGCTCACACAATGGGATTTGG
CTGTGGAAGTTGATGACACGTCCAGCGATGAAAATGTGAAGGAAGTTCCACCTCAACTCC
TATTTATTCATCAAGGACAGAAAGACACTAAAGAGCTTCACTGGCACCCACAGATACCAG
GACTTATAATAAGCACTGCTCTTGATGGGTTTAACGTTTTTAAAACGATTAGCGTGTAAT
GTTGCTGTTTAACTGAAGGTTGTAAGTATGGCTGGCAATCTATCTTCCTGAGCTAATGAG
ATATTGTCCAAAGCATATACCCAAGACACAAATGGGGTGTTCCAAGGTTGATGCACATTG
CTTTGCAATACTTGTTTTTAAATAAACTGCCATGGT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-297] 1.9E-82 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[4-289] 7.83E-48 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[22-36] 3.1E-6 - T[134-148] 3.1E-6 - T[179-193] 3.1E-6 |
| SMART |
WD40_repeat (IPR001680) - T[60-100] 0.0046 - T[106-147] 7.1E-6 - T[153-192] 3.2E-7 - T[198-238] 2.7E-7 - T[256-294] 440.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[67-247] 30.479 |
| Pfam |
WD40_repeat (IPR001680) - T[111-147] 3.0E-6 - T[156-192] 1.1E-6 - T[200-238] 0.0042 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[114-149] 13.282 - T[160-194] 14.552 - T[205-239] 10.007 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[179-193] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 56.766 % | 380 | 1.52E-131 |
| RBBP7_HUMAN | 31.973 % | 134 | 2.14E-36 |
| RBBP4_HUMAN | 31.293 % | 134 | 3.1E-36 |