Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R285...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R2858.2010-5660.10628.t

Possible name(s)

AP4B1; COPG1; COPG2

Gene model

Cisavi.CG.ENS81.R2858.2010-5660

Location

R2858 [2,009 / 5,660]

Sequences

Amino acid sequence

Length: 285

>Cisavi.CG.ENS81.R2858.2010-5660.10628.p
GNNPYAYIERNVVLQEARIFQQTPINPRKCGEILTKIIYLINQGEIISTNEATETFFAMT
KLFQSNDVILRRMCYLTIKEMAKMTENAFIVTQSLTKDMNGREDIFRAAAVRALCAITDH
STLQGIERYMKQAIVDKVHSVSSAALVSSLHLTKQAFDVVKRWVNEVQESCSNDSIMVQY
HALGLLYHLRKKDRLATSKMVTKFMKSGMKSPFAYCMLIRIASKLLEEDDSGRDSPLFNF
IESCLRNKHELVIYEAASAIVNMPNCSARELAPAVSGWSYELGAI

Nucleotide sequence

Length: 932

>Cisavi.CG.ENS81.R2858.2010-5660.10628.t
TAAAAAACAATTTTATTTTAAAATAAACTGGTATAATGCCTGGCATTCGAAAGGACAAAG
ATGAAGAAATTGGTGGAAACAACCCGTACGCATACATCGAGCGGAATGTGGTGTTACAGG
AAGCTCGAATCTTCCAGCAGACGCCGATCAATCCTCGCAAATGTGGAGAAATCCTCACCA
AGATCATATATTTGATCAACCAGGGGGAAATTATTTCGACGAATGAAGCGACCGAGACTT
TCTTCGCGATGACAAAGCTGTTTCAATCGAATGATGTGATTCTTCGACGAATGTGTTATT
TGACAATTAAGGAAATGGCCAAGATGACAGAAAATGCATTCATTGTTACGCAAAGTCTGA
CGAAAGACATGAACGGTCGTGAAGATATCTTCCGAGCGGCAGCGGTACGAGCATTATGTG
CGATCACCGACCACAGCACATTGCAGGGGATCGAACGATACATGAAACAAGCCATTGTGG
ATAAGGTTCACTCTGTGTCTAGCGCCGCCCTAGTGTCATCCCTGCACCTGACGAAGCAAG
CGTTTGACGTGGTGAAACGCTGGGTGAACGAGGTCCAGGAATCTTGTTCCAATGACAGCA
TTATGGTCCAGTACCACGCGTTGGGCCTCTTGTACCACTTGCGCAAGAAGGACCGCTTGG
CCACGTCGAAGATGGTAACAAAGTTCATGAAATCCGGGATGAAATCTCCGTTCGCGTATT
GCATGCTCATTCGTATCGCTAGCAAACTGCTGGAGGAGGATGACTCTGGTCGCGACAGCC
CGCTCTTTAACTTCATTGAGAGTTGTCTGAGGAACAAACACGAGTTGGTAATCTATGAAG
CAGCGTCCGCCATCGTGAATATGCCCAACTGCTCAGCACGGGAACTCGCTCCAGCTGTTT
CTGGTTGGTCTTATGAGTTAGGAGCAATCTAG

InterProScan

PANTHER	Coatomer_gsu (IPR017106) - T[1-276] 4.9E-147
Gene3D	ARM-like (IPR011989) - T[7-280] 3.1E-93
SUPERFAMILY	ARM-type_fold (IPR016024) - T[10-266] 1.6E-36
Pfam	Clathrin/coatomer_adapt-like_N (IPR002553) - T[10-268] 2.4E-57

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COPG2_HUMAN	72.464 %	414	1.54E-139
COPG1_HUMAN	73.551 %	415	5.8E-140