- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.253393-257045.13719.t
Possible name(s)
RDH11; RDH12; RDH14
Gene model
Location
R27 [253,392 / 257,045]
Amino acid sequence
Length: 303
>Cisavi.CG.ENS81.R27.253393-257045.13719.p
MTKSVSGGWVRTEITMTGKTVIITGANTGIGLETAIDLVKRGARVILGCRNTDKAEAAKQ
RIVTETEGNEDKVILKKLDLSSLSSVRSFAKEIIETESKINVLLNNAGVMMIPKGKTEDG
FETHYGVNHLGHFLLTNLLLDLIKKSAPSRIVSVSSSAHNVWSPNLDFDDMNYDRNYSET
SAYSRSKLMNILFTRELSKRLEGTNVTANSLHPGAVRTELARHVYGSNWKWFIQPFLALF
GKTPAKGAQTNIYLCVAPELENVTGKYFADCAVKGESNAAKNDDVAKRLWDVSMNATGLT
QTI
Nucleotide sequence
Length: 1,226
>Cisavi.CG.ENS81.R27.253393-257045.13719.t
AGAAAGGTTTAGTGAATAAACAAACAATGACTAAAAGTGTAAGTGGTGGCTGGGTCAGAA
CTGAAATCACAATGACAGGGAAAACTGTCATTATCACGGGCGCCAATACCGGCATCGGAT
TGGAAACAGCGATTGATTTGGTGAAACGCGGAGCAAGAGTAATTCTTGGCTGCAGGAACA
CTGATAAAGCGGAAGCAGCAAAACAACGGATTGTTACCGAGACTGAAGGAAACGAAGATA
AAGTAATCTTAAAGAAATTAGATCTGTCCTCCCTTTCGTCGGTTCGCTCCTTTGCAAAAG
AAATTATTGAAACTGAATCCAAGATAAATGTTTTGCTGAACAATGCTGGTGTTATGATGA
TTCCAAAAGGGAAGACAGAAGACGGCTTTGAAACTCACTATGGAGTCAACCACCTTGGTC
ACTTCTTACTTACCAATCTCCTGCTTGATCTTATAAAGAAAAGTGCACCAAGTCGAATCG
TAAGCGTTTCCTCTTCGGCACATAACGTATGGTCACCAAACCTTGATTTCGATGACATGA
ACTACGATCGAAACTACTCTGAGACTTCAGCTTATTCCCGTAGTAAACTGATGAACATAT
TGTTTACACGAGAACTTAGTAAACGGCTTGAAGGTACGAATGTGACTGCCAACTCTCTCC
ACCCTGGTGCAGTTCGTACTGAATTGGCTCGACACGTGTATGGGTCGAATTGGAAGTGGT
TCATCCAACCATTTTTAGCCTTGTTTGGCAAAACACCGGCTAAAGGCGCACAAACCAACA
TCTACCTTTGTGTTGCACCAGAACTGGAGAATGTCACTGGAAAATACTTTGCAGATTGTG
CTGTCAAGGGTGAAAGCAATGCGGCAAAAAACGACGACGTGGCAAAGCGACTTTGGGATG
TGAGCATGAACGCAACAGGATTAACACAAACTATATAAAGTGAACTTTCAACTTTTAATT
ATTTTTTTTCGAGAAAATGATTGTGTTGAACCAAAGCAATAAAAATGTTTTAATTTCATA
CACAGCAATAGCTCCAACAGCCTAACAATGCATGTGTGATACCGCCTCTTTCTTTTCTAT
TTAATTGTATAAACTATCCTATATATCCTTCTAATTCAAAGCTACCTCCACCTTCCCAAT
TTACTAGCTTTTAATCAAATCTGCTGTTATTATATGAACTGTAAAACTGCACTTTTTTAA
ATAAAACCAGCAATGCAATTAGCAAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[15-272] 7.75E-61 |
| Pfam |
SDR_fam (IPR002347) - T[19-161] 8.1E-26 |
| PRINTS |
SDR_fam (IPR002347) - T[20-37] 2.7E-17 - T[98-109] 4.4E-5 - T[98-109] 2.7E-17 - T[143-159] 2.7E-17 - T[149-157] 4.4E-5 - T[183-202] 4.4E-5 - T[183-202] 2.7E-17 - T[204-221] 2.7E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 49.495 % | 275 | 9.83E-92 |
| RDH14_HUMAN | 50.498 % | 279 | 4.27E-93 |
| RDH12_HUMAN | 48.837 % | 272 | 9.25E-91 |
