- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.1947497-1967094.18415.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
R27 [1,947,640 / 1,954,759]
Amino acid sequence
Length: 382
>Cisavi.CG.ENS81.R27.1947497-1967094.18415.p
NRKVCYYYDSDIGNNYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKCNAEEMSRY
HSDDYIKFLRSIRPDNIKCSDVSQIEYVAGINVGEDCPVFDGLYEFCQLSGGGSIAGAVK
INKHQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV
EEAFYTTDRVMTVSFHKYGESFPRTGDLRVGMILDAGKGKYYALNFPLRDGMDDECYEQI
FQPVITKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGCHAKCLEYVKKFNVPILMLG
GGGYTIRNVARCWTYETAVALGQEIPNELPYNDYFEYFGPDFKLHISPSNMSNQNTMEYL
QKIRQRLFENLRMLPHAPGVQM
Nucleotide sequence
Length: 1,146
>Cisavi.CG.ENS81.R27.1947497-1967094.18415.t
AACCGGAAAGTGTGCTACTATTATGACTCTGACATCGGGAACAATTATTATGGACAAGGT
CACCCGATGAAGCCACATAGAATTCGCATGACTCACAACCTTCTTCTTAATTATGGGCTT
TACAGAAAAATGGAAATCTATCGTCCACATAAATGCAATGCGGAAGAAATGTCCCGTTAC
CATAGTGATGACTACATCAAATTTCTACGAAGTATTAGACCAGACAACATCAAATGCAGC
GATGTAAGTCAAATTGAATATGTTGCTGGAATTAATGTTGGTGAAGATTGCCCGGTATTT
GATGGACTTTATGAGTTCTGCCAGTTATCTGGTGGTGGTTCCATTGCTGGAGCAGTTAAG
ATCAATAAGCACCAAACCGATATTGCAATAAATTGGGCAGGGGGCCTTCACCATGCAAAA
AAATCTGAAGCATCAGGATTTTGCTATGTCAATGACATTGTACTGGCTATATTAGAGTTA
CTAAAATACCACCAGCGTGTCCTGTACATCGACATAGACATCCATCATGGAGATGGGGTG
GAGGAGGCTTTTTACACAACCGACCGCGTTATGACTGTGTCTTTCCATAAATACGGTGAA
TCTTTCCCACGAACTGGTGATCTTCGGGTAGGAATGATATTGGACGCTGGGAAAGGAAAA
TACTACGCTCTTAACTTCCCTCTCAGAGATGGAATGGACGACGAATGCTATGAGCAGATC
TTCCAGCCTGTTATTACCAAGGTGATGGAATATTACCAACCCAGTGCAGTTGTGTTGCAG
TGCGGTGCTGATTCCTTGACCGGAGATCGACTCGGTTGTTTCAACCTAACAGTGAAAGGT
TGTCATGCGAAATGCCTGGAATACGTGAAGAAGTTCAATGTCCCAATCCTGATGCTGGGA
GGTGGAGGGTATACCATCCGGAATGTGGCTCGATGCTGGACTTATGAGACGGCTGTCGCA
CTTGGTCAGGAAATCCCGAATGAGCTGCCCTATAATGATTACTTCGAGTATTTTGGACCA
GATTTTAAGCTCCACATCAGTCCTAGCAACATGAGCAATCAGAACACGATGGAATACCTG
CAGAAAATCCGCCAGCGATTGTTCGAAAACTTAAGGATGCTCCCTCATGCCCCTGGTGTT
CAAATG
| PIRSF |
His_deacetylse_1 (IPR003084) - T[1-382] 2.3E-202 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[1-376] 1.3E-159 |
| PANTHER |
His_deacetylse (IPR000286) - T[2-382] 1.6E-225 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[2-374] 1.44E-121 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[21-318] 2.4E-77 |
| PRINTS |
His_deacetylse_1 (IPR003084) - T[23-40] 4.4E-69 - T[56-74] 4.4E-69 - T[91-108] 4.4E-69 - T[112-132] 4.4E-69 - T[153-169] 4.4E-69 - T[215-228] 4.4E-69 - T[232-250] 4.4E-69 |
| PRINTS |
His_deacetylse (IPR000286) - T[134-157] 9.1E-25 - T[166-181] 9.1E-25 - T[254-264] 9.1E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 84.514 % | 677 | 0 |
| HDAC2_HUMAN | 84.252 % | 652 | 0 |
| HDAC3_HUMAN | 61.458 % | 499 | 3.65E-177 |