- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.1947497-1967094.18414.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
R27 [1,947,616 / 1,967,062]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R27.1947497-1967094.18414.p
MALTNPGGNRKVCYYYDSDIGNNYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKC
NAEEMSRYHSDDYIKFLRSIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSGGGSIA
GAVKINKHQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGESFPRTGDLRVGMILDAGKGKYYALNFPLRDGMDDEC
YEQIFQPVITKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGCHAKCLEYVKKFNVPI
LMLGGGGYTIRNVARCWTYETAVALGQEIPNELPYNDYFEYFGPDFKLHISPSNMSNQNT
MEYLQKIRQRLFENLRMLPHAPGVQMQDIPPDAIVSGSDDETVDNPDQRTSIRASDKRIQ
RPDEYSDSEDEGEGGRKNEESHKKKKRKYME
Nucleotide sequence
Length: 1,825
>Cisavi.CG.ENS81.R27.1947497-1967094.18414.t
ATGGCCCTGACAAACCCTGGAGGAAACCGGAAAGTGTGCTACTATTATGACTCTGACATC
GGGAACAATTATTATGGACAAGGTCACCCGATGAAGCCACATAGAATTCGCATGACTCAC
AACCTTCTTCTTAATTATGGGCTTTACAGAAAAATGGAAATCTATCGTCCACATAAATGC
AATGCGGAAGAAATGTCCCGTTACCATAGTGATGACTACATCAAATTTCTACGAAGTATT
AGACCAGACAACATGTCCGAATACACAAAGCAAATGCAGCGATTTAATGTTGGTGAAGAT
TGCCCGGTATTTGATGGACTTTATGAGTTCTGCCAGTTATCTGGTGGTGGTTCCATTGCT
GGAGCAGTTAAGATCAATAAGCACCAAACCGATATTGCAATAAATTGGGCAGGGGGCCTT
CACCATGCAAAAAAATCTGAAGCATCAGGATTTTGCTATGTCAATGACATTGTACTGGCT
ATATTAGAGTTACTAAAATACCACCAGCGTGTCCTGTACATCGACATAGACATCCATCAT
GGAGATGGGGTGGAGGAGGCTTTTTACACAACCGACCGCGTTATGACTGTGTCTTTCCAT
AAATACGGTGAATCTTTCCCACGAACTGGTGATCTTCGGGTAGGAATGATATTGGACGCT
GGGAAAGGAAAATACTACGCTCTTAACTTCCCTCTCAGAGATGGAATGGACGACGAATGC
TATGAGCAGATCTTCCAGCCTGTTATTACCAAGGTGATGGAATATTACCAACCCAGTGCA
GTTGTGTTGCAGTGCGGTGCTGATTCCTTGACCGGAGATCGACTCGGTTGTTTCAACCTA
ACAGTGAAAGGTTGTCATGCGAAATGCCTGGAATACGTGAAGAAGTTCAATGTCCCAATC
CTGATGCTGGGAGGTGGAGGGTATACCATCCGGAATGTGGCTCGATGCTGGACTTATGAG
ACGGCTGTCGCACTTGGTCAGGAAATCCCGAATGAGCTGCCCTATAATGATTACTTCGAG
TATTTTGGACCAGATTTTAAGCTCCACATCAGTCCTAGCAACATGAGCAATCAGAACACG
ATGGAATACCTGCAGAAAATCCGCCAGCGATTGTTCGAAAACTTAAGGATGCTCCCTCAT
GCCCCTGGTGTTCAAATGCAAGACATTCCACCTGATGCTATTGTATCTGGAAGCGATGAT
GAAACTGTTGACAATCCTGACCAAAGAACTTCGATTCGCGCATCGGACAAACGGATCCAG
CGTCCAGATGAATACTCCGACTCCGAGGATGAGGGCGAAGGAGGCCGGAAGAACGAGGAG
TCGCACAAAAAGAAGAAAAGAAAGTACATGGAAGGTGACGCGACCGTTCAGGAATCCAAA
GCGCCTGTGAGTGGGACACCCGCGCAAAACGGAGTGACGAAGCAAGAAGATGCGACTTCA
GACTCCAGTGCGCCAGTAAAAACAGCCGAAAACGGGGAAAATCCTGTGACTGGCGACGCT
AACAGCAAAGACGCGGTTGTACCAGAAACGGCCACCGAAGAGAAAGCAAACTCAGAAGCT
AGAAGCGACCCCCCACCTGATGCAACTGAAGAAAAGGAAGCAGCATCTAGTGTCGAGGCA
AAAGCAACTGAACCAGATCCCGCGCCCGTGGAAGAGCAACAACCTGCTGATGAAAAGATG
GAGATCTGATCACTGCTTTGACAACCTCCCGCCATTCCCATCTTTGCCATTTTGGACTAG
TCGGCTCGCTTCCCGCGAACCCTTTCAATATGTCCATTCTTGTATAAAACACATTTTCGG
TGCAATTTCACCGCATTCTCACAGG
| PIRSF |
His_deacetylse_1 (IPR003084) - T[1-451] 1.1E-216 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[8-380] 2.2E-165 |
| PANTHER |
His_deacetylse (IPR000286) - T[8-447] 2.2E-252 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[10-378] 2.35E-123 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[29-322] 2.0E-77 |
| PRINTS |
His_deacetylse_1 (IPR003084) - T[31-48] 1.5E-69 - T[64-82] 1.5E-69 - T[95-112] 1.5E-69 - T[116-136] 1.5E-69 - T[157-173] 1.5E-69 - T[219-232] 1.5E-69 - T[236-254] 1.5E-69 |
| PRINTS |
His_deacetylse (IPR000286) - T[138-161] 1.4E-24 - T[170-185] 1.4E-24 - T[258-268] 1.4E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 82.998 % | 742 | 0 |
| HDAC2_HUMAN | 82.589 % | 759 | 0 |
| HDAC3_HUMAN | 58.314 % | 530 | 0 |