- Transcript 'KH2012:KH.C9.220.v1....' >
- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.1947497-1967094.18413.t
Possible name(s)
HDAC1; HDAC2; HDAC3
Gene model
Location
R27 [1,947,607 / 1,967,062]
Amino acid sequence
Length: 379
>Cisavi.CG.ENS81.R27.1947497-1967094.18413.p
STIMALTNPGGNRKVCYYYDSDIGNNYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRP
HKCNAEEMSRYHSDDYIKFLRSIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSGGG
SIAGAVKINKHQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDID
IHHGDGVEEAFYTTDRVMTVSFHKYGESFPRTGDLRVGMILDAGKGKYYALNFPLRDGMD
DECYEQIFQPVITKVMEYYQPSAVVLQCGADSLTGDRLGCFNLTVKGCHAKCLEYVKKFN
VPILMLGGGGYTIRNVARCWTYETAVALGQEIPNELPYNDYFEYFGPDFKLHISPSNMSN
QNTMEYLQKIRQRLFENLR
Nucleotide sequence
Length: 1,875
>Cisavi.CG.ENS81.R27.1947497-1967094.18413.t
TCAACAATCATGGCCCTGACAAACCCTGGAGGAAACCGGAAAGTGTGCTACTATTATGAC
TCTGACATCGGGAACAATTATTATGGACAAGGTCACCCGATGAAGCCACATAGAATTCGC
ATGACTCACAACCTTCTTCTTAATTATGGGCTTTACAGAAAAATGGAAATCTATCGTCCA
CATAAATGCAATGCGGAAGAAATGTCCCGTTACCATAGTGATGACTACATCAAATTTCTA
CGAAGTATTAGACCAGACAACATGTCCGAATACACAAAGCAAATGCAGCGATTTAATGTT
GGTGAAGATTGCCCGGTATTTGATGGACTTTATGAGTTCTGCCAGTTATCTGGTGGTGGT
TCCATTGCTGGAGCAGTTAAGATCAATAAGCACCAAACCGATATTGCAATAAATTGGGCA
GGGGGCCTTCACCATGCAAAAAAATCTGAAGCATCAGGATTTTGCTATGTCAATGACATT
GTACTGGCTATATTAGAGTTACTAAAATACCACCAGCGTGTCCTGTACATCGACATAGAC
ATCCATCATGGAGATGGGGTGGAGGAGGCTTTTTACACAACCGACCGCGTTATGACTGTG
TCTTTCCATAAATACGGTGAATCTTTCCCACGAACTGGTGATCTTCGGGTAGGAATGATA
TTGGACGCTGGGAAAGGAAAATACTACGCTCTTAACTTCCCTCTCAGAGATGGAATGGAC
GACGAATGCTATGAGCAGATCTTCCAGCCTGTTATTACCAAGGTGATGGAATATTACCAA
CCCAGTGCAGTTGTGTTGCAGTGCGGTGCTGATTCCTTGACCGGAGATCGACTCGGTTGT
TTCAACCTAACAGTGAAAGGTTGTCATGCGAAATGCCTGGAATACGTGAAGAAGTTCAAT
GTCCCAATCCTGATGCTGGGAGGTGGAGGGTATACCATCCGGAATGTGGCTCGATGCTGG
ACTTATGAGACGGCTGTCGCACTTGGTCAGGAAATCCCGAATGAGCTGCCCTATAATGAT
TACTTCGAGTATTTTGGACCAGATTTTAAGCTCCACATCAGTCCTAGCAACATGAGCAAT
CAGAACACGATGGAATACCTGCAGAAAATCCGCCAGCGATTGTTCGAAAACTTAAGGATG
CTCCCTCATGCCCCTGGTGTTCAAATGCAAGACATTCCACCTGATGCTATTGTATCTGGA
AGCGATGATGAAACTGTTGACAATCCTGACCAAAGAACTTCGATTCGCGCATCGGACAAA
CGGATCCAGCGTCCAGATGAATACTCCGACTCCGAGGATGAGGGCGAAGGAGGCCGGAAG
AACGAGGAGTCGCACAAAAAGAAGAAAAGAAAGTACATGGAAGGTGACGCGACCGTTCAG
GAATCCAAAGCGCCTGTGAGTGGGACACCCGCGCAAAACGGAGTGACGAAGCAAGAAGAT
GCGACTTCAGACTCCAGTGCGCCAGTAAAAACAGCCGAAAACGGGGAAAATCCTGTGACT
GGCGACGCTAACAGCAAAGACGCGGTTGTACCAGAAACGGCCACCGAAGAGAAAGCAAAC
TCAGAAGCTAGAAGCGACCCCCCACCTGATGCAACTGAAGAAAAGGAAGCAGCATCTAGT
GTCGAGGCAAAAGCAACTGAACCAGATCCCGCGCCCGTGGAAGAGCAACAACCTGCTGAT
GAAAAGATGGAGATCTGATCACTGCTTTGACAACCTCCCGCCATTCCCATCTTTGCCATT
TTGGACTAGTCGGCTCGCTTCCCGCGAACCCTTTCAATATGTCCATTCTTGTATAAAAAC
CTAAACACCTGCTAGTCAAATTTTGCCGGCCGCATTAAACACATTTTCGGTGCAATTTCA
CCGCATTCTCACAGG
| PIRSF |
His_deacetylse_1 (IPR003084) - T[2-379] 2.5E-205 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[11-379] 1.4E-164 |
| PANTHER |
His_deacetylse (IPR000286) - T[11-379] 1.2E-226 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[13-378] 7.67E-123 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[32-325] 1.1E-77 |
| PRINTS |
His_deacetylse_1 (IPR003084) - T[34-51] 5.4E-70 - T[67-85] 5.4E-70 - T[98-115] 5.4E-70 - T[119-139] 5.4E-70 - T[160-176] 5.4E-70 - T[222-235] 5.4E-70 - T[239-257] 5.4E-70 |
| PRINTS |
His_deacetylse (IPR000286) - T[141-164] 9.0E-25 - T[173-188] 9.0E-25 - T[261-271] 9.0E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC1_HUMAN | 86.17 % | 686 | 0 |
| HDAC2_HUMAN | 85.904 % | 665 | 0 |
| HDAC3_HUMAN | 62.703 % | 500 | 8.49E-178 |