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  1. Transcript 'Cisavi.CG.ENS81.R27....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R27.1853480-1862045.18350.t

Possible name(s)

RNF13; RNF167; ZNRF4

Gene model

Cisavi.CG.ENS81.R27.1853480-1862045

Location

R27 [1,853,479 / 1,862,045]

Sequences

Amino acid sequence

Length: 436

>Cisavi.CG.ENS81.R27.1853480-1862045.18350.p
MMTKNSSLLIIFLLSGLTTSYGLIYAFDRRNISEQFADYPAEFGTNIGKDGIEGILMTAN
PLQACTKVKTRPYPSETYGIPNVTISAFALVERGGCDFAIKVLNAQDANYDGVIVYNDKL
DNELVHMRTDRTDIANQIVIPSVFVDHESGLILTKNFLYNNKNEPMIKIYNSDAPFSLEY
YIIPFVTVLCTCIVVLLVFMLFRYLRDRRRQRRNRLSRRRLKQIPTKQFNKGDEYDVCAI
CLDEYEEGDTLRILPCQHAYHCKCVDPWLTSSKRVCPLCKRRVLSDDESSGSESDYDSDN
ERAPLLTHSSVESSPNSSRRATGFQENPLAFNHSSASSYITETSSDSDDDHTYSPQSSLS
NLHGVHSAQVSASATSPMHVQTDHSSSPDVRSSLEVYSCVSGEDSIVGSFNDAHQISILQ
HGTNQSTSDDKDSTIT

Nucleotide sequence

Length: 2,168

>Cisavi.CG.ENS81.R27.1853480-1862045.18350.t
AAACTACTGTCAATATAAAAGTTAATGTTTGTGTACTGTACCTGATTGGACTCGAATCGG
ACATATTTACATTTATATATCAAAAAGGAAAATCACACATTGTATCAATGAAGTAACCTC
ATCCTGGCAGTTTTGCATTTTCTTATATCAGCAAGAAGTGGATTTTTAAAATGATGACAA
AGAACTCTTCTTTGTTAATTATCTTCCTTTTGTCTGGTTTGACAACAAGTTATGGACTCA
TTTATGCATTTGATCGTCGAAACATCAGTGAACAGTTTGCTGATTACCCTGCTGAGTTTG
GTACAAATATTGGAAAAGATGGAATTGAGGGTATATTAATGACTGCAAATCCACTGCAAG
CATGTACAAAAGTGAAAACCAGACCATATCCATCAGAGACATATGGTATACCTAACGTTA
CAATTTCTGCATTTGCTCTTGTGGAAAGAGGGGGTTGTGACTTTGCTATTAAAGTTCTCA
ATGCACAAGATGCAAACTATGATGGAGTCATTGTGTACAATGATAAACTCGATAACGAGC
TTGTGCATATGCGGACAGATCGCACTGATATTGCCAACCAGATTGTCATACCATCTGTGT
TTGTTGATCACGAGTCTGGTCTTATTCTGACAAAAAACTTCCTCTACAATAATAAGAATG
AACCGATGATTAAGATATACAACAGTGACGCTCCATTCTCGCTTGAATATTATATTATCC
CATTTGTCACTGTCCTTTGTACCTGCATCGTTGTATTGCTTGTGTTCATGCTTTTTCGAT
ATCTGCGTGATAGAAGAAGGCAAAGAAGAAATAGACTGTCACGCCGAAGACTAAAACAAA
TACCAACCAAACAGTTCAATAAAGGGGATGAGTATGATGTTTGTGCCATTTGTCTTGATG
AATACGAGGAAGGGGATACACTCAGGATATTACCTTGTCAGCATGCATACCATTGCAAAT
GTGTTGACCCGTGGCTTACAAGCAGCAAGAGGGTTTGTCCTTTATGCAAACGCCGTGTTT
TAAGTGATGATGAGTCTTCTGGGTCTGAATCGGATTATGACAGTGACAATGAAAGAGCTC
CCCTGCTGACGCACAGCTCAGTGGAATCCTCCCCAAACTCATCCAGAAGAGCAACCGGCT
TCCAGGAAAATCCTCTCGCTTTTAACCACTCCAGCGCATCAAGCTACATCACTGAAACAA
GTTCTGACTCTGATGACGATCATACCTATTCACCTCAATCTTCATTGTCCAATCTACATG
GAGTTCATTCTGCTCAAGTCTCAGCCTCTGCAACATCACCCATGCATGTACAAACAGACC
ATTCTTCCTCTCCTGACGTTCGAAGTTCACTAGAAGTTTACAGTTGCGTGAGTGGAGAAG
ACAGCATCGTTGGTTCATTCAATGATGCCCATCAAATATCTATTCTACAACATGGAACCA
ACCAATCAACTTCAGATGACAAGGATTCAACCATTACATAAATCTGTATTTTATATAAAA
GTCTTTTTCTTTAACAGTGGTTGAATTAGTTTTGCCTGAAAATTTCTTTTAGTCCTTGTA
TATAGTTTTACAGTGATTCAATGTCTTATTTCTAAGCTGATTTTTGATGCGATTCCTTTT
CTATATAATCTTCATATCTGATTGCAGCTACTTACTACAATCATTTTTACCAAAATTAGA
TATACACCAGTAGATCCCTTTACAAAATTCACACTGCAATTTCTGCAATTAGTTGATTTC
ATGGTATTTTCCAGTTTTGTGCATAGAAAAGTGTAATGGAGTGCTTAAACATAAACTTTT
CTTAAATCTCTATTTTCTGCAATAAATGGTATAAGAACATGGTGACTGGTAAGATTTAAA
AAAGTTTTTTCACTATGTTTAAACTGTGCAGTTATTTTCTTAACTTGTGTCCAATATTGC
CAGACTGCGAAAATGGTAAATAAGCTTCATTGAATTTTGTCTAACCTGATTTATAAACCA
ATGATTCAATCAAAATAGTATGACATAACTTTTAATATTGATGTTATCTTTGTAGAAATT
ACCAAATTTATTCTTCTTGTTCTTAATTTTGCTTCTTTTTAAACATGTATAGGTCTAATA
TAATACCCCATTGCATAAATAATAAATTCACATTACCGTAGTATAAATTATTACAATAAA
TAACAAAA

InterProScan

Pfam
PA_domain (IPR003137) - T[86-151] 7.1E-9
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[202-285] 2.9E-19
Pfam
Znf_RING (IPR001841) - T[237-280] 5.0E-13
SMART
Znf_RING (IPR001841) - T[238-279] 4.7E-8
ProSiteProfiles
Znf_RING (IPR001841) - T[238-280] 12.843

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNF13_HUMAN 37.5 % 229 2.32E-71
RN167_HUMAN 38.053 % 228 4.67E-71
ZNRF4_HUMAN 35.64 % 157 2.21E-43