- Transcript 'Cisavi.CG.ENS81.R27....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R27.1660532-1666466.18109.t
Possible name(s)
MTF1; ZNF143; ZNF76
Gene model
Location
R27 [1,660,531 / 1,666,466]
Amino acid sequence
Length: 184
>Cisavi.CG.ENS81.R27.1660532-1666466.18109.p
MEREIKRFKCSYTGCKRMYTTAGNLKSHQKTHRGEYYFICDQSGCGKAFLTSYSLKVHVR
VHTKERPYRCTDHDCEKSFNTLYRLKAHQRIHNGQTFNCNSEGCTKFFTTLSDLKKHYRT
HTGERPFKCSIPDCLKSFTVSHHLKSHLRTHTGEKPYVCEEGGCSKAYTAQHSLKQHKSK
DHAN
Nucleotide sequence
Length: 806
>Cisavi.CG.ENS81.R27.1660532-1666466.18109.t
CCCGGAGTGGAAATGGTACAAATATTGCTTTGGATAAGATTCAAGGGAATTCTTTCGACA
GCTCAACCTCAACTTCAACCATAAGTGACTTAATGGAAGATGATGACCACTGTCGGAAGG
GTGTGATTCACCATACAATTATGCCTGATGAGGACAAGGTTTTTATGGCATTTTCTCCAT
CCATGGACGTGTGCATGCCACAGGAAAACGATATAGATGGCGCAACAATAACTTTAACCA
GCACTGATGATCGAATGGAGAGGGAAATTAAACGTTTTAAATGTTCGTACACTGGATGTA
AACGCATGTACACCACTGCAGGCAATTTGAAATCCCATCAAAAAACTCACAGGGGCGAAT
ATTACTTCATTTGTGACCAGAGTGGATGTGGTAAAGCATTTCTTACAAGTTATAGTTTAA
AAGTCCATGTGAGGGTACACACAAAAGAACGACCCTACCGCTGTACGGATCATGACTGTG
AAAAGTCATTTAACACACTATACAGGTTGAAAGCTCACCAGAGGATTCATAACGGACAGA
CTTTCAATTGTAATTCAGAAGGCTGTACCAAGTTTTTCACTACATTGAGTGATCTCAAAA
AACATTACAGAACTCACACAGGAGAACGGCCATTCAAGTGTAGTATCCCAGACTGCCTGA
AGTCGTTTACTGTGAGCCATCATTTAAAATCGCACTTACGGACACACACTGGAGAGAAGC
CATATGTGTGTGAGGAGGGCGGCTGCAGCAAAGCATATACTGCTCAACACAGTTTAAAGC
AGCACAAGTCGAAAGATCACGCAAAC
| PANTHER |
Metal_TF1 (IPR029796) - T[2-182] 1.8E-118 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[6-62] 3.92E-11 - T[48-102] 2.56E-13 - T[113-155] 1.1E-14 - T[146-178] 2.43E-9 |
| SMART |
Znf_C2H2_type (IPR013087) - T[8-32] 7.3E-4 - T[38-62] 8.9E-4 - T[68-92] 0.0018 - T[97-121] 0.0078 - T[127-151] 0.0083 - T[157-182] 0.065 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[8-37] 11.676 - T[38-67] 14.877 - T[68-97] 12.736 - T[97-126] 15.396 - T[127-156] 15.978 - T[157-184] 10.18 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[10-32] . - T[40-62] . - T[70-92] . - T[99-121] . - T[129-151] . - T[159-182] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF1_HUMAN | 65.385 % | 271 | 1.19E-87 |
| ZN143_HUMAN | 50.289 % | 178 | 3.48E-53 |
| ZNF76_HUMAN | 49.711 % | 172 | 2.5E-51 |