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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S9...' > 
  2. Transcript 'Cisavi.CG.ENS81.R27....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R27.1587800-1590555.18015.t

Possible name(s)

LASP1; NEBL; NRAP

Gene model

Cisavi.CG.ENS81.R27.1587800-1590555

Location

R27 [1,587,799 / 1,590,555]

Sequences

Amino acid sequence

Length: 233

>Cisavi.CG.ENS81.R27.1587800-1590555.18015.p
MNPSCARCKKTVYPVEKLNCLDKIWHKSCFSCEICGIKLCMTTYKGYNKLPYCNTHYPST
RFTQVSDTPEYRKLAQQQKSQSVIQYSKVLLCLLKVQQEQSGTENPYSKVYAVRLLIHLS
FSGSTAAATTRPPQPTQVKLHLHDLRSSPHTAVKIITTCDKPPAPAPTVARTVLSTEKYI
ALYDYNAADDDEVSFNEGDIVTEATIIDDGWMEGRVVRTGEYGMLPTNYVNKV

Nucleotide sequence

Length: 978

>Cisavi.CG.ENS81.R27.1587800-1590555.18015.t
GCTTAAATATGAACCCCTCTTGTGCAAGATGCAAAAAGACTGTCTATCCAGTGGAGAAAC
TAAATTGCTTGGACAAGATTTGGCATAAATCCTGCTTTTCCTGCGAAATATGCGGAATCA
AATTGTGTATGACGACATATAAAGGGTACAACAAACTTCCATACTGCAACACCCACTATC
CAAGCACTAGATTCACGCAAGTGTCGGATACGCCAGAATACAGAAAATTGGCACAGCAGC
AAAAGTCTCAATCGGTGATTCAGTACAGCAAGGTACTACTTTGTTTATTGAAGGTACAGC
AAGAACAGTCTGGAACAGAAAATCCGTACAGCAAGGTATACGCTGTTCGTTTGTTAATTC
ACCTTTCTTTCAGCGGCTCAACTGCAGCTGCGACTACTCGGCCACCTCAACCCACACAAG
TAAAATTGCATTTGCATGATTTACGTTCAAGCCCTCATACTGCCGTAAAAATAATTACCA
CCTGTGATAAACCGCCTGCACCCGCACCAACTGTCGCGCGAACTGTGCTTAGCACTGAAA
AGTATATAGCTCTATACGATTACAATGCTGCAGACGATGATGAAGTTTCTTTCAATGAAG
GCGACATTGTGACTGAAGCAACTATAATAGACGACGGTTGGATGGAAGGAAGGGTGGTTC
GTACTGGTGAATATGGAATGCTGCCCACCAACTATGTGAATAAAGTATAGCAATTGCGAT
ACCGATCATTCGCCCATTTACTCGCCACATTAAGGCAAAATTATTTAGAAATATATAGTC
TACCGTGTTTTTATAAAAAGGAATTATCTATATAATTCACACAATCAAACCAATAGACAT
TTTTAGTAGTTGGTATTTATTTTGTATTCAGATAGATCTTGGTTGGTAAATTTTGTTGCT
GTGTTTTAGCATTTTGTCGTTTAAATTTGAGCTAAATTATTCCAGTGACAATTGACAAGC
ATTAACAGGACAAAAATA

InterProScan

ProSiteProfiles
Znf_LIM (IPR001781) - T[3-63] 12.84
SMART
Znf_LIM (IPR001781) - T[4-56] 8.9E-13
ProSitePatterns
Znf_LIM (IPR001781) - T[5-39] .
Pfam
Znf_LIM (IPR001781) - T[5-58] 2.5E-10
SUPERFAMILY
SH3-like_dom_sf (IPR036028) - T[151-232] 4.07E-19
ProSiteProfiles
SH3_domain (IPR001452) - T[174-233] 16.577
SMART
SH3_domain (IPR001452) - T[177-233] 3.5E-14
PRINTS
SH3_domain (IPR001452) - T[177-187] 1.8E-8 - T[191-206] 1.8E-8 - T[208-217] 1.8E-8 - T[221-233] 1.8E-8
Pfam
SH3_domain (IPR001452) - T[181-230] 1.5E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NRAP_HUMAN 46.97 % 79.7 4.75E-17
LASP1_HUMAN 38.697 % 179 5.14E-56