- Transcript 'Cisavi.CG.ENS81.R268...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R268.365159-368426.20283.t
Possible name(s)
DAZL; PABPC1L; TRNAU1AP
Gene model
Location
R268 [365,158 / 368,214]
Amino acid sequence
Length: 189
>Cisavi.CG.ENS81.R268.365159-368426.20283.p
MDETFINKAFLLVSQPVSVKVIRRKDNGLPAGYCFIEFPSEAEAERVLKLVNGTNITGSN
PTKRFRLNRSQAGKMWDIGPSFSIFVGDLDASVTDDKLEDFFLKRYRSVKGAKIMYEEGG
VSRGYGFVRFSDESEQKRALVEMQGAKGLGAKSIRVSVATPKENFRATPLYQIALLLALL
LSQLHTANN
Nucleotide sequence
Length: 1,046
>Cisavi.CG.ENS81.R268.365159-368426.20283.t
GCGAAACAGCTTAAAACGCATTTTTGTGCGTGCAGTTGGATCCATATATGGATGAAACCT
TTATCAACAAAGCGTTTTTGCTTGTAAGTCAGCCGGTATCTGTGAAAGTTATTAGAAGGA
AAGACAATGGGCTGCCAGCAGGTTATTGCTTTATAGAATTTCCATCTGAAGCAGAGGCTG
AACGTGTACTTAAGCTTGTGAATGGCACCAACATCACAGGAAGTAACCCAACAAAGAGAT
TCCGTCTCAATAGATCACAGGCTGGAAAGATGTGGGATATCGGACCGTCCTTCTCGATAT
TTGTTGGAGACCTGGATGCTTCTGTGACTGATGACAAACTGGAGGACTTTTTTTTAAAAC
GCTACAGATCGGTAAAGGGAGCAAAAATCATGTATGAGGAGGGTGGTGTTTCAAGGGGAT
ATGGATTTGTGCGATTCAGCGATGAAAGCGAACAAAAGAGGGCATTAGTTGAAATGCAAG
GAGCAAAAGGTCTCGGTGCAAAATCAATTCGTGTCAGTGTTGCTACTCCGAAAGAAAACT
TTCGAGCAACTCCACTGTACCAGATAGCATTGTTGCTAGCTCTGCTACTGAGCCAACTTC
ATACAGCCAACAATTGATGCAACAATACACTGATCAGTATCAGTATTACCAACAGTACTG
CAACTACTATAACTACCAACAACAGCTTGGCTATTACCAGCAACAAGCTCAAAGTAATGC
TGTAACCAGCGGTATGTTACAATCATCAGTTGAGCAATATGCATCAACAGATCACTATCG
CACAACCAGACTACAACAGCAAGACATTGGAAAACTTGAAGACCCAAACCCCACAGCTGA
TAGAGAACAGGAAAATCATAGCTACTTCATCTGCAAAACTTCATTAATTGATATGCTGGG
AAATCACTGGCAGCCAATAGACTCCGTTACATCAAGAATTCCGGATATTCTATCCATATC
ATAAAATTCGTATTGAACTGTACCGTTACAACAAAATTGTACATGCTTTATTTTTATTTT
CCTCAATAAACGACAAGTAAGAATTA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-70] 7.4E-14 - T[81-158] 3.3E-21 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[1-72] 9.849 - T[82-161] 16.927 |
| SMART |
RRM_dom (IPR000504) - T[1-65] 1.8 - T[83-157] 7.9E-15 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[2-163] 2.13E-28 |
| Pfam |
RRM_dom (IPR000504) - T[17-59] 8.8E-7 - T[84-150] 3.0E-14 |
| CDD |
SECp43_RRM2 (IPR034510) - T[81-162] 1.89584E-48 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSAP1_HUMAN | 51.462 % | 179 | 1.75E-56 |
