Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R268.347493-352460.20277.t

Possible name(s)

RNF144A; RNF144B; RNF19B

Gene model

Cisavi.CG.ENS81.R268.347493-352460

Location

R268 [347,492 / 352,460]

Sequences

Amino acid sequence

Length: 333

>Cisavi.CG.ENS81.R268.347493-352460.20277.p
MPNCLKYDSEGFSPKDIPTSCKLCLDDHIAVEDIVIIKSCECGFCIQIELLSKPDTYEKY
KRLKFEQEVAIDPRRTFCPEVSCSAVCHVCTNSYLYSSVAPQAVQCATCHLRFCYTCKAE
WKHNHKCSEYTRTFGSEFQNLQNRTGFSFGGHNASIKRCPVCNILIEKDRGCAQMICKHC
SHVFCWYCLKLLDNDFMLRHYDSGPCRNLLGHSRAQVFRHRIGVIGLFTALSLLLLVASP
VLVLAAPVILCCKCKECCQQVINQAQQHRGSVDVQLRSDKVLTENVLASNHDVELDDVLV
CESSGTFPSVSNENAGNLTDETSDMKKVLETTT

Nucleotide sequence

Length: 1,324

>Cisavi.CG.ENS81.R268.347493-352460.20277.t
TAAATTGCAGTACAGTTGACTCCGGAGTTGCAATCCCGTCTTGTGTTTCTTCTTCATCAG
ATAATGAACCATTCAACCCTACCAAATGTATGCCAAACTGTTTAAAATACGACTCTGAAG
GCTTTAGTCCAAAAGATATTCCAACTTCATGTAAACTATGCCTGGATGATCATATTGCTG
TTGAAGATATAGTTATTATCAAGTCATGTGAATGTGGCTTTTGTATCCAGATTGAACTTC
TATCAAAACCGGATACATACGAAAAATACAAACGCTTGAAATTTGAACAAGAAGTCGCCA
TTGACCCCCGAAGAACATTCTGTCCAGAAGTATCATGTTCCGCAGTGTGCCATGTTTGTA
CCAACTCATATTTGTATAGTTCAGTTGCTCCTCAAGCAGTGCAGTGTGCCACGTGTCATC
TAAGATTCTGCTATACCTGCAAAGCTGAGTGGAAGCACAACCACAAATGTAGTGAGTACA
CAAGGACCTTTGGCAGTGAATTTCAAAATCTTCAAAATAGAACTGGATTCTCCTTCGGTG
GCCACAACGCGTCCATAAAGAGATGCCCTGTATGCAACATTCTTATTGAAAAAGACCGTG
GATGTGCACAAATGATTTGCAAACATTGTAGTCATGTTTTCTGCTGGTATTGTTTAAAGT
TGCTGGATAATGATTTTATGCTGAGGCATTATGACAGTGGACCTTGTAGAAACTTGCTTG
GACACAGCAGAGCACAAGTTTTTCGCCACAGAATTGGGGTTATTGGACTGTTCACAGCAC
TTTCATTATTGCTTCTTGTTGCTTCTCCTGTTCTTGTACTTGCTGCGCCAGTTATACTAT
GCTGCAAATGTAAAGAGTGTTGTCAACAGGTAATCAATCAAGCACAGCAACACAGAGGAT
CTGTAGATGTTCAATTACGATCCGATAAAGTTTTAACAGAAAATGTTTTAGCGAGCAATC
ACGATGTTGAGCTAGATGATGTCCTTGTATGCGAGTCATCCGGAACTTTTCCAAGCGTTT
CTAATGAAAACGCGGGCAACTTAACAGATGAAACTTCTGATATGAAGAAAGTATTAGAGA
CCACAACTTAAATAAAAATATTGCAAATCACATGCTGTATGTTGCATATTTGATTTGTTA
TACAAACTTATACATTTTAAAATTTTCTTTTAATACTTCGTCTTTACAGCCAGATGCACT
TAAAATACGTTCTGATTAACTTTAAAGTACTGTTTTTCATAAACTGTACATTTATCTTGT
TCGATGTATAGTTTTTGATTCTAAATTTACCCTGCCCCTCTTTCTTGGTTGTGAAGGTAA
TTAT

InterProScan

PANTHER	E3_UB_ligase_RBR (IPR031127) - T[18-47] 8.3E-73 - T[53-254] 8.3E-73
Pfam	IBR_dom (IPR002867) - T[58-127] 8.6E-9 - T[153-191] 3.1E-7
SMART	IBR_dom (IPR002867) - T[58-127] 5.7E-6 - T[139-206] 0.2
ProSitePatterns	Znf_RING_CS (IPR017907) - T[180-189] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
R144A_HUMAN	43.636 %	224	5.95E-72
R144B_HUMAN	38.567 %	199	3.71E-62