- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'Cisavi.CG.ENS81.R251...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R251.172502-196442.03270.t
Possible name(s)
NCOA7; OXR1; TLDC2
Gene model
Location
R251 [172,501 / 196,442]
Amino acid sequence
Length: 680
>Cisavi.CG.ENS81.R251.172502-196442.03270.p
MFCSAQNTERKPNQPVGTTQYNVGSRDTLRSIAVNFNTTPSNLMKLNKMSSSYIFPDQVI
FVPETNILKETAEKVRPTSGSSFDGDFSFLAPLSASPPSPEISFNKSNQFQDLLVVSVQD
SLKDANCNSKLLTKFAPVAKQPENNSEIPTTPTIMRGTSQTSEDGHNQSGTRKRVISNES
DSDKFEENFIKTTVRYITSSQETVEGTLLVTPTNIMFDPDRNDPLAIKHGCEKFGIMCNL
TLVTSVSMFSDKGCMVTSHSTQSTASKDAKSDTLPPQDVTLLAEDPDAIVTTSSNQEPPK
SPSNQSDSSERITRADLKLKEEFPFLDSIVKSVGDFFSEEDLDSTMKPPAQQVERMYLCV
RSDVPMMKTFSTHSELDAGNSHMTSSKTNDQSKETWFQTHRDRSDQLLAFFMQWNPDPYA
LDFAEQNGFVVMDPLTEFELNDKTKCDLISKEDRGRTSTNTSLEFIEDFFSDSRIEKEWE
IVSVDEARRRSTLGAIELANDDTSLMPDLLDSSNLLNDDTLLELCRHIPARTIGCPWKLL
YSTFEHGISLRTLYRKVASKYNDDTPVVLIVQDSGGQIFGAFCSNQPHVSEHFYGTGETF
LFTLEPNITIFPWSGENNFFVKGNLDSLAIGGGDGSSGLWLDGDLCHGSSHTCLTFQNDP
LASSEDFFIQNVEVWGFDNN
Nucleotide sequence
Length: 2,435
>Cisavi.CG.ENS81.R251.172502-196442.03270.t
GTTTATAGAAGCCAAGCAAAATTATACTTTTTGTGCTGATTTGTGTGTGGGGAAACAATG
TTTTGTAGCGCTCAAAATACAGAACGAAAACCGAATCAACCAGTGGGCACTACTCAATAT
AATGTTGGCAGTCGCGACACTTTACGAAGTATTGCCGTCAACTTTAACACTACTCCATCA
AACCTTATGAAGCTAAACAAAATGTCATCAAGCTATATCTTCCCAGACCAAGTTATATTC
GTCCCGGAGACAAATATCTTGAAAGAAACTGCTGAAAAAGTCCGTCCAACATCTGGATCA
AGTTTCGATGGAGATTTTTCATTCCTAGCCCCTCTGTCCGCTTCGCCACCTTCCCCTGAG
ATTAGTTTCAATAAATCAAACCAGTTTCAAGATCTTCTTGTTGTTTCTGTGCAAGACAGT
TTAAAAGACGCCAATTGCAATTCAAAATTACTTACAAAATTTGCACCAGTAGCAAAACAA
CCAGAGAACAACTCAGAAATACCGACCACTCCAACCATTATGCGAGGAACATCCCAAACT
TCAGAGGATGGCCATAACCAAAGTGGAACACGCAAACGTGTAATTTCAAATGAATCTGAT
TCTGATAAATTTGAGGAAAATTTCATTAAAACAACTGTCCGTTATATCACATCTTCCCAG
GAAACGGTTGAGGGAACGTTGCTTGTCACCCCCACCAACATTATGTTTGACCCGGACCGC
AATGACCCCCTCGCCATCAAGCATGGGTGCGAAAAGTTTGGGATCATGTGCAATCTAACG
CTGGTGACCAGTGTCTCTATGTTCAGTGACAAAGGTTGTATGGTGACAAGCCACAGTACA
CAAAGCACCGCTTCAAAAGATGCCAAATCCGACACTCTTCCGCCACAAGATGTCACTCTT
CTTGCCGAGGACCCAGATGCCATCGTAACCACGTCGTCCAATCAGGAGCCTCCAAAATCT
CCGTCCAACCAATCAGATTCCAGCGAGAGAATTACCCGGGCAGATTTAAAGTTGAAGGAA
GAATTTCCATTTTTGGATTCTATTGTCAAGTCTGTTGGAGATTTTTTTTCAGAAGAGGAT
CTCGACTCCACCATGAAACCACCTGCCCAACAAGTAGAACGAATGTATTTATGCGTAAGA
TCTGACGTTCCAATGATGAAGACCTTTTCCACACACTCCGAACTTGACGCGGGAAACTCC
CACATGACGTCATCGAAAACCAACGACCAATCCAAAGAAACGTGGTTCCAAACGCACCGG
GACAGGTCCGACCAGTTGCTGGCGTTCTTCATGCAATGGAATCCGGATCCGTACGCACTT
GATTTCGCTGAGCAAAACGGCTTTGTTGTCATGGATCCACTTACCGAGTTCGAATTGAAC
GACAAAACCAAGTGTGACCTCATAAGTAAGGAAGATAGAGGGCGGACATCCACAAATACA
TCGCTGGAATTTATTGAGGATTTTTTCTCCGATTCAAGAATTGAAAAAGAGTGGGAAATA
GTCAGCGTGGACGAGGCACGCCGACGGTCAACACTGGGCGCAATAGAGCTGGCTAACGAT
GATACTTCACTCATGCCAGATCTGCTCGACAGCAGCAATTTATTGAACGATGATACATTG
CTGGAGTTATGTCGTCACATCCCGGCCCGCACTATTGGTTGCCCATGGAAACTCCTCTAC
AGCACATTCGAACACGGGATCAGCCTACGCACGCTGTACAGGAAGGTGGCCAGCAAATAT
AACGACGATACACCGGTTGTGCTTATTGTGCAAGACAGTGGCGGACAAATTTTCGGCGCT
TTCTGTTCGAACCAGCCGCACGTGAGCGAGCATTTCTACGGGACCGGCGAAACCTTCCTA
TTCACCCTGGAGCCGAACATCACGATATTTCCATGGTCGGGAGAGAATAACTTCTTCGTG
AAAGGGAACCTCGATTCGCTGGCTATCGGCGGCGGAGATGGTTCATCGGGGTTGTGGCTT
GATGGTGACCTGTGCCACGGCAGTAGCCACACGTGCTTGACATTCCAGAACGACCCCCTC
GCCTCCAGTGAGGATTTCTTTATACAGAACGTAGAGGTTTGGGGATTCGACAACAATTGA
ATCGGATGCGCCCTCGCACAACCAACCCGGCCCTACTGTGGCGGTGAAAGTAGCCAAGTG
ATGACCATCTCGGTTTTCTATTCCCTCTCACGACGAAAATCGAACTCGGCAACACTGGAA
ATCAAACCGGACGACTCCACGTCACTGGTCGTACAATTCACTGTGTGTTGCGCAATAACT
TATTTTGTCGTCGTCATAATGGACACCTATTATGACGTACCTCCCTCGGTGCTGCTTAGT
TAGCAGTGCATTGTTGTGTGGTTCAGTGTGCAATCTTCTTTTTTCTATATCGTTTTCCTT
TAAAATTATACCGAGAAGTAAAATCTCCCAAAAAA
| Gene3D |
LysM_dom_sf (IPR036779) - T[4-73] 1.1E-10 |
| ProSiteProfiles |
LysM_dom (IPR018392) - T[19-62] 11.003 |
| CDD |
LysM_dom (IPR018392) - T[19-62] 2.1985E-6 |
| SMART |
LysM_dom (IPR018392) - T[20-63] 2.0E-8 |
| Pfam |
LysM_dom (IPR018392) - T[21-63] 3.2E-9 |
| SMART |
TLDc_dom (IPR006571) - T[513-678] 2.0E-61 |
| Pfam |
TLDc_dom (IPR006571) - T[539-677] 2.4E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OXR1_HUMAN | 39.031 % | 251 | 1.16E-72 |
| NCOA7_HUMAN | 43.21 % | 248 | 3.84E-71 |
| TLDC2_HUMAN | 47.647 % | 170 | 4.96E-49 |