- Transcript 'Cisavi.CG.ENS81.R251...' >
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- Transcript 'Phmamm.CG.MTP2014.S1...' >
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- Transcript 'Cisavi.CG.ENS81.R251...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R251.107897-127837.03044.t
Possible name(s)
FSD1; MID1; MID2
Gene model
Location
R251 [110,658 / 127,837]
Amino acid sequence
Length: 544
>Cisavi.CG.ENS81.R251.107897-127837.03044.p
MDSLENELTCPICLDLFHEPILLPCAHNLCSGCVDQFVASHCASGDQSGFLPTFKCPTCR
EVITLDSKGNTGLRRNLTLQNIVDGYPAAAILGRNNPTRCSILSQIFEILVLSVPAIFIT
AFNAYASNLSMQSDGSLGPSRGRRRSRQETDGKDYVQLTTPMREVRESTDQVSCQFCELK
PPRQAVKTCLTCKAYYCDRCLRVTHPRKKPFINHKLVPASPGNAGTLSAKSKQLNAVHCF
HHVQESADLYCPVCDMALCKSCSLKTDHAHGIECVTEWAFEVQKTTKKRYLKSPRRNYGE
ANCSTKNSLPVFIFSASTKRVFMFQRHAFDNSTVVTTTFEDNIVAIVEDLEMHVTRLSNQ
KAEIQRNVTKLVEACQQIEVTAESQESKLHSEVESLIRVIREREAAIVSRIKDTKTTRLR
KLTQEVTSSRQCLESLHSSVMYTGADQLAHRNARATYFRSGEPITQTNSLAQKITTPDCD
IECPGFYLDFSQERAMLERMNIMEAPSPPKICEELCTQSHDKVTIQWRSPDHRHVAAYEL
QYAV
Nucleotide sequence
Length: 1,632
>Cisavi.CG.ENS81.R251.107897-127837.03044.t
ATGGATTCCTTGGAGAACGAACTCACCTGCCCGATTTGCCTTGATTTATTCCACGAGCCA
ATACTACTGCCATGCGCACACAATCTCTGCTCCGGGTGCGTCGATCAATTCGTTGCCTCC
CACTGCGCATCGGGAGATCAAAGCGGTTTCCTGCCGACGTTCAAGTGCCCGACGTGCCGC
GAGGTGATCACGTTGGACTCGAAGGGTAACACGGGTCTTCGCCGAAACCTGACCCTGCAA
AACATAGTGGACGGATACCCAGCAGCAGCAATTCTAGGCCGAAATAATCCTACTAGGTGT
TCGATTTTAAGCCAAATATTTGAGATTCTTGTTCTTTCCGTGCCTGCTATATTTATCACA
GCATTCAATGCTTACGCTTCGAACCTGTCGATGCAAAGTGACGGAAGCCTCGGTCCCAGC
AGAGGACGACGACGCTCCCGTCAGGAAACGGACGGCAAGGATTACGTGCAGCTGACCACA
CCCATGCGCGAAGTTCGGGAATCGACAGACCAGGTATCCTGTCAATTCTGCGAGCTGAAG
CCTCCGAGACAAGCGGTGAAGACTTGTCTGACGTGCAAGGCTTACTACTGCGACCGGTGT
CTGCGAGTCACACACCCGAGAAAGAAGCCTTTCATCAATCACAAGCTAGTACCGGCAAGT
CCCGGAAATGCTGGCACCCTCTCAGCCAAGTCAAAGCAACTAAATGCAGTTCACTGCTTC
CACCACGTTCAGGAGAGTGCGGACCTGTACTGTCCGGTTTGCGACATGGCATTGTGTAAA
AGCTGCAGCCTCAAGACGGACCACGCCCATGGCATTGAATGCGTTACAGAATGGGCGTTT
GAGGTGCAAAAAACGACAAAAAAACGTTATTTAAAATCGCCTCGAAGAAATTACGGCGAA
GCAAATTGCTCGACTAAAAACTCTTTACCTGTTTTCATCTTTTCCGCTTCCACCAAACGT
GTATTTATGTTTCAGCGGCACGCTTTTGATAATTCAACTGTCGTGACTACTACATTCGAA
GATAATATCGTCGCTATTGTTGAGGACCTTGAAATGCACGTGACCAGGTTATCCAATCAG
AAAGCAGAAATTCAACGAAACGTCACAAAGCTGGTTGAAGCTTGTCAACAAATCGAGGTT
ACAGCCGAATCCCAAGAATCAAAACTCCACTCTGAAGTCGAAAGTCTCATCCGAGTTATA
AGGGAAAGAGAGGCGGCAATCGTCAGCAGAATTAAAGATACAAAGACCACCCGACTACGG
AAGCTTACCCAAGAAGTGACGTCATCCCGCCAATGTCTGGAGTCTCTGCACAGTAGTGTA
ATGTATACTGGGGCCGATCAATTAGCCCACAGAAACGCGCGCGCAACATACTTTCGCAGC
GGCGAACCGATCACGCAAACCAACTCGTTGGCCCAGAAGATCACCACGCCCGACTGCGAC
ATCGAGTGTCCGGGATTTTACCTTGATTTCTCCCAAGAGCGCGCGATGTTGGAGAGAATG
AACATCATGGAAGCCCCTTCTCCCCCCAAAATATGCGAAGAACTATGCACGCAATCGCAC
GACAAAGTCACTATTCAGTGGAGATCGCCCGACCATCGCCATGTAGCTGCCTACGAGTTG
CAGTACGCCGTG
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1-90] 3.9E-19 |
| SMART |
Znf_RING (IPR001841) - T[10-59] 2.6E-6 - T[174-254] 6.8 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[10-57] 4.4E-7 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[10-60] 11.56 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[25-34] . |
| SMART |
Znf_B-box (IPR000315) - T[169-219] 0.0018 - T[234-275] 2.3 |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[169-219] 8.702 - T[234-268] 10.637 |
| SMART |
Bbox_C (IPR003649) - T[346-473] 5.1E-7 |
| Gene3D |
Ig-like_fold (IPR013783) - T[505-544] 8.5E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI55_HUMAN | 44.444 % | 84.3 | 3.3E-17 |
| TRI18_HUMAN | 29.636 % | 256 | 4.33E-77 |
| TRIM1_HUMAN | 31.949 % | 277 | 1.34E-84 |