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- Transcript 'Cisavi.CG.ENS81.R251...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R251.107897-127837.03041.t
Possible name(s)
FSD1; MID1; MID2
Gene model
Location
R251 [108,279 / 127,837]
Amino acid sequence
Length: 670
>Cisavi.CG.ENS81.R251.107897-127837.03041.p
MDSLENELTCPICLDLFHEPILLPCAHNLCSGCVDQFVASHCASGDQSGFLPTFKCPTCR
EVITLDSKGNTGLRRNLTLQNIVDGYRRAAATVSSPHRNEFDRTNTSSVRESTDQVSCQF
CELKPPRQAVKTCLTCKAYYCDRCLRVTHPRKKPFINHKLVPASPGNAGTLSAKSKQLNA
VHCFHHVQESADLYCPVCDMALCKSCSLGPRPPMALNALQNGAERKRQDLEMHVTRLSNQ
KAEIQRNVTKLVEACQQIEVTAESQESKLHSEVESLIRVIREREAAIVSRIKDTKTTRLR
KLTQEVTSSRQCLESLHSSVMYTGADQLAHRNARATYFRSGEPITQTNSLAQKITTPDCD
IECPGFYLDFSQERAMLERMNIMEAPSPPKICEELCTQSHDKVTIQWRSPDHRHVAAYEL
QYAVDNNKVSDNSTQEGWMIVPNIKECHYTINGMQTGTRYIFMVKAKNKAGTSRSEQLSI
KTLGIPFQFDAHSMHKKLRLANHSYTVSREDSGKKSKDFLGSSKDNSVCGVTGNVTIDSG
RHYWEVVTCQSTSFTIGVCYAQAARYDWNGKNPMSWCFCRTNDDWFARHDSKDTPVIMPS
PEPKKIGVLLDCDTGCVAFFDGASGRMIYTFRVSHFERPVRPCFTVGNKSLTINTGVTVP
DHLHPIACSS
Nucleotide sequence
Length: 2,013
>Cisavi.CG.ENS81.R251.107897-127837.03041.t
ATGGATTCCTTGGAGAACGAACTCACCTGCCCGATTTGCCTTGATTTATTCCACGAGCCA
ATACTACTGCCATGCGCACACAATCTCTGCTCCGGGTGCGTCGATCAATTCGTTGCCTCC
CACTGCGCATCGGGAGATCAAAGCGGTTTCCTGCCGACGTTCAAGTGCCCGACGTGCCGC
GAGGTGATCACGTTGGACTCGAAGGGTAACACGGGTCTTCGCCGAAACCTGACCCTGCAA
AACATAGTGGACGGATACCGTCGGGCCGCTGCAACTGTCTCATCACCGCATAGAAACGAA
TTTGACCGAACAAACACCAGCTCTGTTCGGGAATCGACAGACCAGGTATCCTGTCAATTC
TGCGAGCTGAAGCCTCCGAGACAAGCGGTGAAGACTTGTCTGACGTGCAAGGCTTACTAC
TGCGACCGGTGTCTGCGAGTCACACACCCGAGAAAGAAGCCTTTCATCAATCACAAGCTA
GTACCGGCAAGTCCCGGAAATGCTGGCACCCTCTCAGCCAAGTCAAAGCAACTAAATGCA
GTTCACTGCTTCCACCACGTTCAGGAGAGTGCGGACCTGTACTGTCCGGTTTGCGACATG
GCATTGTGTAAAAGCTGCAGCCTCGGACCACGACCGCCCATGGCATTGAATGCGTTACAG
AATGGTGCAGAAAGAAAAAGGCAAGACCTTGAAATGCACGTGACCAGGTTATCCAATCAG
AAAGCAGAAATTCAACGAAACGTCACAAAGCTGGTTGAAGCTTGTCAACAAATCGAGGTT
ACAGCCGAATCCCAAGAATCAAAACTCCACTCTGAAGTCGAAAGTCTCATCCGAGTTATA
AGGGAAAGAGAGGCGGCAATCGTCAGCAGAATTAAAGATACAAAGACCACCCGACTACGG
AAGCTTACCCAAGAAGTGACGTCATCCCGCCAATGTCTGGAGTCTCTGCACAGTAGTGTA
ATGTATACTGGGGCCGATCAATTAGCCCACAGAAACGCGCGCGCAACATACTTTCGCAGC
GGCGAACCGATCACGCAAACCAACTCGTTGGCCCAGAAGATCACCACGCCCGACTGCGAC
ATCGAGTGTCCGGGATTTTACCTTGATTTCTCCCAAGAGCGCGCGATGTTGGAGAGAATG
AACATCATGGAAGCCCCTTCTCCCCCCAAAATATGCGAAGAACTATGCACGCAATCGCAC
GACAAAGTCACTATTCAGTGGAGATCGCCCGACCATCGCCATGTAGCTGCCTACGAGTTG
CAGTACGCCGTGGACAACAACAAGGTCTCCGACAACAGCACACAAGAAGGGTGGATGATC
GTGCCCAATATCAAGGAATGCCACTACACGATCAACGGCATGCAGACTGGAACCCGCTAT
ATTTTCATGGTGAAAGCGAAAAACAAAGCAGGCACAAGCAGGAGTGAACAGCTGTCAATC
AAAACTTTAGGAATTCCTTTCCAGTTTGATGCGCACTCAATGCACAAGAAGCTTAGACTA
GCCAATCACAGCTACACCGTGTCACGTGAGGACTCTGGCAAGAAATCGAAGGATTTTCTT
GGAAGCAGCAAAGACAACTCGGTTTGCGGTGTCACCGGGAACGTCACAATCGACTCTGGC
CGCCATTACTGGGAGGTGGTGACATGCCAAAGTACTTCCTTCACCATTGGCGTTTGCTAC
GCGCAAGCTGCGAGGTACGACTGGAACGGCAAGAACCCGATGTCGTGGTGTTTCTGCAGG
ACCAACGATGATTGGTTTGCCCGGCACGACAGTAAGGATACCCCAGTCATTATGCCGAGC
CCGGAGCCAAAGAAAATCGGTGTGCTGTTGGATTGCGATACGGGATGCGTAGCGTTCTTC
GACGGAGCAAGCGGCCGGATGATCTACACATTCCGTGTCAGCCACTTCGAGCGACCGGTT
CGTCCCTGTTTCACCGTCGGCAACAAGTCGTTGACCATTAACACCGGGGTCACGGTCCCA
GATCACTTACACCCGATAGCATGCAGCTCTTGA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1-91] 1.5E-19 |
| SMART |
Znf_RING (IPR001841) - T[10-59] 2.6E-6 - T[118-198] 6.8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[10-60] 11.56 |
| Pfam |
Znf-RING_LisH (IPR027370) - T[10-57] 2.5E-7 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[25-34] . |
| ProSiteProfiles |
Znf_B-box (IPR000315) - T[113-163] 8.702 - T[178-207] 9.286 |
| SMART |
Znf_B-box (IPR000315) - T[113-163] 0.0018 - T[178-214] 4.9 |
| SMART |
Bbox_C (IPR003649) - T[226-353] 1.7E-8 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[379-484] 1.12E-13 |
| Gene3D |
Ig-like_fold (IPR013783) - T[385-481] 2.4E-25 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[385-485] 13.389 |
| SMART |
FN3_dom (IPR003961) - T[386-473] 1.4E-6 |
| Pfam |
FN3_dom (IPR003961) - T[397-474] 1.1E-9 |
| CDD |
FN3_dom (IPR003961) - T[399-482] 1.31543E-9 |
| ProSiteProfiles |
B30.2/SPRY (IPR001870) - T[467-660] 21.286 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[486-653] 1.19E-34 |
| PRINTS |
Butyrophylin_SPRY (IPR003879) - T[524-548] 7.9E-14 - T[554-567] 7.9E-14 - T[597-621] 7.9E-14 - T[628-646] 7.9E-14 |
| SMART |
SPRY_dom (IPR003877) - T[539-659] 1.1E-14 |
| Pfam |
SPRY_dom (IPR003877) - T[541-656] 1.1E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRI18_HUMAN | 41.902 % | 562 | 0 |
| TRIM1_HUMAN | 39.545 % | 536 | 0 |
| FSD1_HUMAN | 25.667 % | 159 | 5.22E-42 |