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- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.909221-915181.13410.t
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
R24 [909,701 / 915,139]
Amino acid sequence
Length: 381
>Cisavi.CG.ENS81.R24.909221-915181.13410.p
QNVISTTTEEATTPNSLSHELDDRDLFISVSNPEKHITTMETHITYKITTKTTRSSFDSS
EYAAQRRYQDFVWLRNKLEEKHPTHLIPPLPAKFIMKGMLDRFNLDFTQTRCRALHNFLD
RISRHPILSFDENLRVFLTAKAYEFTAHRKQTDSFMSRVGGSVKSISSATTRLKERDPEF
DEILNSVTQFGDKMGVLERVAERLHLEKKDLSSELKEFAPTFSLWSASEDDVIAPIMTSL
STAIESCAEAAESNSKIHEYEYMPPLREYILYSDVVKQVLKRRDGFQSQHDRVAADLQQK
KEEKGNLSKKCDDLGDKMECANANLRSDVDRWNVDKLHDMAQIFNDLADSQIQFHQQCLK
AWEHILPTMQDKDPVEGYESV
Nucleotide sequence
Length: 1,404
>Cisavi.CG.ENS81.R24.909221-915181.13410.t
CAGAATGTGATATCAACTACGACAGAAGAAGCCACTACACCAAACTCATTAAGTCATGAA
CTTGACGACAGAGATCTTTTTATATCGGTCTCAAACCCAGAGAAACACATTACAACCATG
GAGACTCACATAACGTACAAGATAACTACAAAGACCACCAGAAGCTCGTTCGATAGCAGC
GAATATGCTGCGCAACGTCGATACCAGGACTTTGTGTGGCTTCGAAATAAGCTAGAGGAA
AAACACCCAACACATCTTATTCCACCATTGCCCGCAAAGTTCATTATGAAAGGAATGCTT
GACCGTTTCAACTTGGATTTTACGCAAACACGATGCAGAGCGCTCCACAACTTTCTTGAT
CGGATATCAAGACACCCGATTCTTTCTTTTGATGAAAATCTCAGAGTCTTCTTAACAGCT
AAGGCATATGAATTCACTGCGCATCGTAAACAAACCGACAGTTTCATGTCACGAGTCGGG
GGATCCGTGAAATCGATTTCTTCCGCCACCACTCGGCTCAAGGAGCGAGACCCAGAGTTT
GACGAGATCCTCAACTCTGTCACCCAGTTTGGTGACAAGATGGGGGTTCTGGAGCGCGTG
GCGGAGCGACTGCATTTGGAGAAGAAAGATTTGTCTTCGGAATTGAAGGAATTTGCGCCG
ACATTTTCTCTATGGTCGGCATCTGAAGATGATGTCATAGCTCCCATTATGACATCATTG
AGCACTGCAATAGAATCTTGTGCCGAAGCTGCCGAATCGAACTCGAAAATCCACGAGTAC
GAGTACATGCCACCACTCAGGGAATACATCTTATACTCCGACGTGGTGAAGCAAGTGTTA
AAACGGAGAGATGGATTTCAAAGCCAACATGATCGGGTGGCTGCTGACCTGCAACAAAAG
AAAGAGGAAAAAGGCAATTTGTCGAAAAAGTGTGACGACCTTGGAGACAAGATGGAATGT
GCCAACGCCAACCTGCGATCCGACGTGGACCGGTGGAATGTCGATAAACTGCACGACATG
GCTCAGATATTCAACGACCTTGCCGATTCGCAGATACAATTTCATCAACAGTGCTTAAAG
GCGTGGGAACACATATTACCAACCATGCAAGATAAGGATCCCGTAGAAGGTTACGAGTCC
GTTTGATGGATACTGTATCAAATTGTGTAACAAACCACTTCTTTATCCACCTCCAAAATT
CAACCAACTGTCTTCACATGCTCAATCTTTAAACTCGCTCATTCCAATTAAAATATGATT
ATAGCATTTATAAAATACTTATTTTCCTGGAGATTTCTAATTTTTCATATAAACCCGTTT
TGTGAGTCCATATTAAAAGTCTCAAATTTTTAAGATTTCTTCAAATTTGAACTTTTGATT
GTTCTATATTCTATCATGTATCGT
| Gene3D |
PX_dom_sf (IPR036871) - T[19-155] 1.6E-37 |
| SMART |
Phox (IPR001683) - T[23-141] 2.3E-21 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[23-142] 2.62E-31 |
| ProSiteProfiles |
Phox (IPR001683) - T[24-145] 17.217 |
| Pfam |
Phox (IPR001683) - T[28-139] 6.1E-23 |
| Pfam |
Vps5_C (IPR015404) - T[158-325] 7.1E-14 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[170-371] 6.8E-41 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[188-370] 4.19E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 26.913 % | 124 | 3.04E-31 |
| SNX30_HUMAN | 44.126 % | 325 | 1.01E-108 |
| SNX7_HUMAN | 42.105 % | 326 | 9.81E-110 |