- Transcript 'KH2012:KH.C2.821.v1....' >
- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.909221-915181.13409.t
Possible name(s)
SNX2; SNX30; SNX7
Gene model
Location
R24 [909,220 / 915,181]
Amino acid sequence
Length: 444
>Cisavi.CG.ENS81.R24.909221-915181.13409.p
MEEGRKLSETGVDPLSQVDEEEPSDLFDDEENVISTTTEEATTPNSLSHELDDRDLFISV
SNPEKHITTMETHITYKITTKTTRSSFDSSEYAAQRRYQDFVWLRNKLEEKHPTHLIPPL
PAKFIMKGMLDRFNLDFTQTRCRALHNFLDRISRHPILSFDENLRVFLTAKEFTAHRKQT
DSFMSRVGGSVKSISSATTRLKERDPEFDEILNSVTQFGDKMGVLERVAERLHLEKKDLS
SELKEFAPTFSLWSASEDDVIAPIMTSLSTAIESCAEAAESNSKIHEYEYMPPLREYILY
SDVVKQVLKRRDGFQSQHDRVAADLQQKKEEKGNLPKSDQSYSVGALMGKSPDDVKDQKD
SKLDLQIEELSKKCDDLGDKMECANANLRSDVDRWNVDKLHDMAQIFNDLADSQIQFHQQ
CLKAWEHILPTMQDKDPVEGYESV
Nucleotide sequence
Length: 1,684
>Cisavi.CG.ENS81.R24.909221-915181.13409.t
GCAAAACAAAAATTCCAAATTGTTATAGGTTTTTATATGTTGGATAAAAATGGAAGAGGG
TAGGAAATTATCCGAAACTGGAGTTGATCCGCTTAGTCAAGTAGACGAAGAAGAACCTTC
GGATTTATTTGACGATGAAGAGAATGTGATATCAACTACGACAGAAGAAGCCACTACACC
AAACTCATTAAGTCATGAACTTGACGACAGAGATCTTTTTATATCGGTCTCAAACCCAGA
GAAACACATTACAACCATGGAGACTCACATAACGTACAAGATAACTACAAAGACCACCAG
AAGCTCGTTCGATAGCAGCGAATATGCTGCGCAACGTCGATACCAGGACTTTGTGTGGCT
TCGAAATAAGCTAGAGGAAAAACACCCAACACATCTTATTCCACCATTGCCCGCAAAGTT
CATTATGAAAGGAATGCTTGACCGTTTCAACTTGGATTTTACGCAAACACGATGCAGAGC
GCTCCACAACTTTCTTGATCGGATATCAAGACACCCGATTCTTTCTTTTGATGAAAATCT
CAGAGTCTTCTTAACAGCTAAGGAATTCACTGCGCATCGTAAACAAACCGACAGTTTCAT
GTCACGAGTCGGGGGATCCGTGAAATCGATTTCTTCCGCCACCACTCGGCTCAAGGAGCG
AGACCCAGAGTTTGACGAGATCCTCAACTCTGTCACCCAGTTTGGTGACAAGATGGGGGT
TCTGGAGCGCGTGGCGGAGCGACTGCATTTGGAGAAGAAAGATTTGTCTTCGGAATTGAA
GGAATTTGCGCCGACATTTTCTCTATGGTCGGCATCTGAAGATGATGTCATAGCTCCCAT
TATGACATCATTGAGCACTGCAATAGAATCTTGTGCCGAAGCTGCCGAATCGAACTCGAA
AATCCACGAGTACGAGTACATGCCACCACTCAGGGAATACATCTTATACTCCGACGTGGT
GAAGCAAGTGTTAAAACGGAGAGATGGATTTCAAAGCCAACATGATCGGGTGGCTGCTGA
CCTGCAACAAAAGAAAGAGGAAAAAGGCAATCTTCCAAAATCCGACCAGTCCTATTCGGT
GGGAGCGCTGATGGGGAAATCCCCTGATGATGTAAAGGACCAGAAGGATTCAAAACTGGA
CCTTCAAATAGAGGAGTTGTCGAAAAAGTGTGACGACCTTGGAGACAAGATGGAATGTGC
CAACGCCAACCTGCGATCCGACGTGGACCGGTGGAATGTCGATAAACTGCACGACATGGC
TCAGATATTCAACGACCTTGCCGATTCGCAGATACAATTTCATCAACAGTGCTTAAAGGC
GTGGGAACACATATTACCAACCATGCAAGATAAGGATCCCGTAGAAGGTTACGAGTCCGT
TTGATGGATACTGTATCAAATTGTGTAACAAACCACTTCTTTATCCACCTCCAAAATTCA
ACCAACTGTCTTCACATGCTCAATCTTTAAACTCGCTCATTCCAATTAAAATATGATTAT
AGCATTTATAAAATACTTATTTTCCTGGAGATTTCTAATTTTTCATATAAACCCGTTTTG
TGAGTCCATATTAAAAGTCTCAAATTTTTAAGATTTCTTCAAATTTGAACTTTTGATTGT
TCTATATTCTATCATGTATCGTTCTTTATTAGTGCAATAAACTAAATCCAACAAAAATAA
TGAA
| Gene3D |
PX_dom_sf (IPR036871) - T[49-184] 1.1E-37 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[53-172] 2.62E-31 |
| SMART |
Phox (IPR001683) - T[53-171] 2.3E-21 |
| ProSiteProfiles |
Phox (IPR001683) - T[54-175] 17.276 |
| Pfam |
Phox (IPR001683) - T[58-169] 8.2E-23 |
| Pfam |
Vps5_C (IPR015404) - T[186-430] 5.4E-20 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[198-434] 1.4E-46 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[216-328] 1.12E-10 - T[370-433] 1.12E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX2_HUMAN | 27.089 % | 134 | 2.72E-34 |
| SNX30_HUMAN | 41.885 % | 319 | 2.07E-105 |
| SNX7_HUMAN | 39.141 % | 306 | 4.83E-101 |