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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Cisavi.CG.ENS81.R234...'
  3. Transcript 'Cisavi.CG.ENS81.R1.3...'
  4. Transcript 'Harore.CG.MTP2014.S2...'
  5. Transcript 'Boleac.CG.SB_v3.S263...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S263.g06254.01.t

Possible name(s)

FARP1; FARP2; FGD6

Location

S263 [47,244 / 63,022]

Sequences

Amino acid sequence

Length: 644

>Boleac.CG.SB_v3.S263.g06254.01.p
MHIIXYTDAKNENLSPPPQHDSTLPNVNLHSGGQHSSDDESTPTGTLSDSGKRVLNTSTR
ELKMPYSDETKHPTDEAYYIAKEFLVTERNYIKDLEVIDKSFKEWLENGDHLLPGDISNQ
IFNTTDSLLSAHRQFKTDLESRMLSWETPPTHPDEKIMIKSGWIDDVVINHIHRIKKMLH
LIENGEDLVRNIERACSEDDQIDAACREFELKKVCYIPITRFLLQPIQRILHYSSLFDRL
FDLYSNKGQVSDHEQLQSTTDDLKRLCGSLKDKLQHAHNFQKLAQLRHDLIGAEDLSLDD
REFVREGSLYKFSKKGFQQRLFFLFSGCLLYTSKGVTSTNQFKVHGELPLRGMIIEINGS
EKTIPNCFXIICGGKTVMVAAASPEEMSKWIEDLNHYIILAKDKPYQSPLIRRTTRPASQ
QSIDQSDDSNSSSRNSLDQSANRSSNQQRTNTTMHVCWHRNTSVGSDDYFVSLQNQLCGY
LLRKFKNSNGWQKLWVVFTNFCLFFYKSHQDEFPLASLPLLGYSVTAPAPTDGIQKEYVF
KLQFKTHVYFFRAESRYTYSSXXSYSLKDEFPLASLPLLGYSVTAPAPTDGIQKEYVFKL
QFKTHVYFFRAESRYTYSRWMEVIRSATGNSKRVRLFSRMESTK

Nucleotide sequence

Length: 3,468

>Boleac.CG.SB_v3.S263.g06254.01.t
ATGCACATAATTATNTATACCGATGCGAAGAATGAGAATCTTTCTCCTCCACCTCAACAT
GATTCCACACTTCCAAATGTTAACCTTCATTCAGGAGGCCAGCATTCCAGTGATGATGAG
TCCACACCTACTGGAACATTGTCAGACTCAGGAAAAAGAGTATTGAATACCAGCACAAGA
GAACTCAAAATGCCATATTCTGATGAAACAAAACACCCTACAGATGAAGCATACTATATT
GCCAAAGAATTTCTTGTGACAGAGAGAAATTACATCAAGGACTTGGAAGTTATCGATAAA
TCATTCAAAGAATGGTTAGAAAATGGAGATCATCTCTTGCCAGGAGACATCAGCAACCAA
ATTTTCAACACCACAGATTCACTTCTTTCTGCTCACAGACAGTTTAAAACAGATTTGGAG
TCACGGATGCTCTCATGGGAAACACCNCCCACACACCCTGATGAAAAAATAATGATTAAA
AGTGGATGGATTGATGATGTTGTTATCAACCATATCCATAGAATCAAGAAAATGCTACAT
CTTATCGAAAATGGAGAGGATTTAGTACGGAATATTGAAAGAGCTTGTTCAGAAGATGAC
CAGATTGATGCTGCTTGCAGAGAATTTGAACTGAAGAAAGTTTGCTACATTCCAATAACA
AGATTTCTGTTGCAACCAATACAGAGGATATTGCATTATTCATCGCTCTTTGATCGACTG
TTTGATTTGTATTCAAACAAAGGTCAGGTATCGGATCATGAGCAATTGCAGTCTACCACG
GATGATTTAAAAAGGCTATGTGGCTCACTGAAAGATAAACTTCAACATGCTCATAATTTT
CAAAAACTCGCTCAACTGCGACATGACCTCATTGGTGCTGAAGATCTTTCTTTGGATGAT
AGGGAATTTGTCCGTGAAGGAAGTTTGTACAAATTCTCAAAGAAAGGCTTTCAACAGAGA
CTGTTCTTTCTTTTCTCTGGATGTCTACTGTATACAAGCAAAGGCGTTACATCCACTAAT
CAATTCAAAGTGCATGGAGAATTACCATTGCGAGGAATGATTATTGAAATCAATGGAAGC
GAGAAAACTATACCCAACTGCTTTAGNATCATATGCGGGGGCAAGACGGTTATGGTTGCT
GCAGCCAGTCCTGAAGAGATGTCAAAATGGATCGAAGACCTCAATCATTACATCATTCTT
GCTAAAGACAAACCNTATCAATCTCCGTTAATAAGGAGAACAACAAGACCTGCCAGCCAA
CAGTCCATTGATCAGTCAGATGATTCAAACTCTTCTTCCCGAAATTCACTCGATCAATCC
GCTAATCGGTCAAGCAATCAACAAAGGACCAACACAACNATGCATGTATGCTGGCACAGA
AACACCAGTGTCGGTTCTGATGACTATTTTGTGTCACTGCAGAACCAACTGTGTGGGTAT
TTACTGAGGAAATTCAAAAATTCCAATGGTTGGCAAAAATTATGGGTTGTCTTCACCAAC
TTCTGTCTCTTCTTTTACAAGTCTCATCAGGATGAATTCCCCCTTGCTAGCTTGCCTCTT
CTTGGATATTCTGTCACTGCTCCAGCTCCTACTGATGGCATCCAAAAAGAATACGTGTTT
AAACTTCAATTTAAAACACATGTCTACTTTTTCCGAGCTGAAAGTAGATACACTTATTCC
AGCANTTTNTCTTATTCTTTGAAGGATGAATTCCCCCTTGCTAGCTTGCCTCTTCTTGGA
TATTCTGTCACTGCTCCAGCTCCTACTGATGGCATCCAAAAAGAATACGTGTTTAAACTT
CAATTTAAAACACATGTCTACTTTTTCCGAGCTGAAAGTAGATACACTTATTCCAGGTGG
ATGGAGGTGATTCGCAGTGCCACCGGCAATTCGAAGAGAGTGCGACTTTTCAGTCGAATG
GAGAGTACAAAATAATTTTAACCGTACAAAGTTGCTACACCTCTCATCATACCTTACTCT
GTTAATATTTACAAATGAAATTTTGATGATGACGGTGCTTGCTTGTGTTATNGTGTGTTG
TGAATTTATCATGAGCTGTTTGTCATTGTCAAATATGTCTTAATGTAATGTTAAACTAGT
ACATACCGCTGTTAATTGTTTTCATACCCTACTTTGCATAACNATTCATATTATTATCAA
ATGAGCTGTTAAGCCCTTGATCTGTTTTCAGTGACTCTATTGCACTGGCTGCGCCTGAAA
TGCCCACGGGGTTGTGAGCTAATTAATCCAGCATGGCACATCTGTGTTCATGCGTTGGCA
GGTTCCTTTTCAAAATTTCTCTTGTACACCATGCAACAGGCGCTGTGGACGGTACACATG
TAAAGATTTTCCATGGGCGCATTTTCATGTCTATTGCATTTTAAGTTGACTACACTGGTT
CAAAATGCCTGTTTTTCTGTAGTTGCCTCGAATTTTGTTAATTCCCCATGCAATTCGACG
TCTGGTTAGAGTGAGGTTTGACCATGTCAAGTGTCCCATGCAATCCTAGAAAGGTACAAT
CGTCACTCTACAACCTGGGGCCTACATTCGTTGCTCATGCAATGCACCCTACTTGTTTTT
CCATTTGCAATGAAATCTGTATTTTTAGCTGTACCTTTACAGTATTGCATTTCGTTGGAG
AGCAATAAGTTTGCGTCATTGGCGTTCGTAGTCATGATTTGGTTCATTCTTGGCAGTAGC
ATTTTGTGTCATCCATATGTGGCCCCATGATAGCATGCGGGAATTGGCCTAATTGATGGG
TTCCCGCACCGTATAGTCCCAGATGACTTGACTTATTCCCACGGATGACGTCGACTGTAT
CAATGTAGACAAGAGGATACGTTCCTGTTTACGTCCAGACATCGTGAAACAAAAGTCCGG
TTGGCGTTTTCGGGTCTTTTCGGTTTCTCGATCTTGGAAATTAGTGTATTTCAGTATCCC
TAATTTGATATTTATTTCATTCGTCAAAAGGCTGCTCTAGGCACGGCACCTGACATTCCC
ATATCACCGTTGAAATAGCTGAATGATGTAGCCTACGATGCATGATTTCATTTCAACGCT
GTCATTATAATCTTGTTTTAATTTCGTTTTTAATCACCATCAAAGTCTTTGGTTTTTTAC
GAATCCTGAAATTTGCACCTCGACCTTCGAGATTTTCTTGGCAACTTGTGCCTATCTATG
AAGACCATGTTGATTGAAGCTGACATGACAAGCTGACGATATCTGGCTGGTCATTCACGT
CTATGGTAGTTTTATGCTGCAATCGCGCGGATAACCGATCCAGGTTGGAATGAAAATTGT
TGGTGCCAGCGGGTGTAATAAAAGTGCCTGCGAGTGTCAATTGATGCTCGAAGAAAAATT
ATTAATCTCGCCCCGTAAAACACACGTTTTCATAGTTACATGAGCTGCATGAAACAATCA
CGGTACTGCCGTAATGTGTTACTGCGTTAATAAACTAATCAATTTCTG

InterProScan

SUPERFAMILY
DBL_dom_sf (IPR035899) - T[67-292] 7.59E-28
Gene3D
DBL_dom_sf (IPR035899) - T[67-283] 5.0E-26
ProSiteProfiles
DH-domain (IPR000219) - T[76-273] 19.189
CDD
DH-domain (IPR000219) - T[78-270] 1.80721E-18
Pfam
DH-domain (IPR000219) - T[80-267] 5.0E-19
SMART
DH-domain (IPR000219) - T[80-279] 8.9E-16
ProSiteProfiles
PH_domain (IPR001849) - T[302-399] 13.733 - T[474-629] 12.484
SMART
PH_domain (IPR001849) - T[303-401] 2.1E-17 - T[475-631] 9.5E-16
Pfam
PH_domain (IPR001849) - T[304-396] 3.1E-10 - T[477-557] 1.3E-9
Gene3D
PH-like_dom_sf (IPR011993) - T[473-559] 1.1E-22 - T[560-632] 1.0E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FARP2_HUMAN 45.85 % 426 9.34E-137
FARP1_HUMAN 42.523 % 421 6.2E-135
FGD6_HUMAN 23.794 % 124 1.92E-29