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  1. Transcript 'Moocul.CG.ELv1_2.S98...' > 
  2. Transcript 'KH2012:KH.C1.123.v1....' > 
  3. Transcript 'Cisavi.CG.ENS81.R15....' > 
  4. Clone 'cima822429' > 
  5. Transcript 'Cisavi.CG.ENS81.R24....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R24.745970-755799.12477.t

Possible name(s)

HDHD5

Gene model

Cisavi.CG.ENS81.R24.745970-755799

Location

R24 [746,358 / 755,799]

Sequences

Amino acid sequence

Length: 351

>Cisavi.CG.ENS81.R24.745970-755799.12477.p
MFKRLTNPDGRFKVPTVFVTNAGNALARTKADQLSNAMGVEITSEQVMMSHSPLRMFPEF
HNKCVLMSGQGPLDQIAKKIGFTNYVTIDQIRDVFPNLDMVDHQRRPKLMSAALTETFPK
IDAVILFGEPVRWETNLQIVIDVLLTHGNLNDPIADDHENQIPILACNMDLLWMSDSHMP
RFGHGTFLHCLESVYEKLVGRPLTYTALMGKPSEVTYIYAEQLIKRIASNMGITSPIKNL
YAIGDNPMADIYGANLFNKRIKQEQEVKQVLPNKPTPFIREVEACHSVLVCTGIYSPEPG
GSSYQIPPVFHGPRDMEFDVNLCVPSFITKDANKAIDRIVKMENFSLESKV

Nucleotide sequence

Length: 1,550

>Cisavi.CG.ENS81.R24.745970-755799.12477.t
TAAATCTCAGGAACCTGGATTTGGGTTGCTGTTTGACATTGATGGAGTGTTAGTACGTGG
CAAAACCCCAATACCAGCAGCTCGCGAAATGTTTAAGCGACTTACCAACCCAGATGGTCG
ATTCAAAGTACCAACTGTGTTCGTCACTAATGCCGGCAACGCATTAGCTCGAACCAAAGC
CGATCAGTTGTCCAATGCAATGGGTGTAGAGATAACATCGGAACAAGTGATGATGTCACA
CAGCCCATTGAGGATGTTCCCAGAGTTCCACAACAAATGTGTTCTTATGTCGGGGCAAGG
ACCCTTGGACCAAATCGCAAAGAAAATCGGATTCACAAATTATGTGACAATTGACCAAAT
ACGTGACGTATTTCCTAATCTAGATATGGTCGATCATCAAAGGAGACCTAAATTGATGTC
AGCAGCTTTGACAGAAACATTCCCGAAAATTGACGCCGTCATTTTGTTTGGAGAGCCTGT
GAGGTGGGAGACAAACCTTCAAATTGTCATAGATGTCCTATTAACACACGGCAATTTGAA
TGACCCAATCGCTGATGACCATGAGAACCAGATCCCAATATTGGCTTGTAATATGGATCT
TCTATGGATGTCGGATTCTCATATGCCAAGGTTTGGTCACGGTACATTCCTTCACTGTTT
AGAGAGTGTGTATGAAAAGTTGGTTGGTCGACCCCTGACGTATACTGCACTTATGGGCAA
GCCGAGCGAAGTCACGTACATCTACGCTGAGCAGCTCATAAAGAGAATAGCTAGCAATAT
GGGAATCACAAGTCCCATTAAAAACCTCTATGCAATTGGAGATAACCCGATGGCTGACAT
CTATGGGGCCAATCTGTTTAACAAGCGAATCAAACAAGAACAGGAAGTGAAGCAGGTGCT
TCCTAACAAACCAACCCCATTCATACGAGAAGTTGAAGCTTGCCATTCTGTGCTTGTGTG
CACGGGTATCTACTCCCCGGAACCTGGGGGCAGTTCTTACCAAATTCCACCGGTATTCCA
CGGTCCCAGAGATATGGAGTTCGACGTCAATTTGTGCGTACCCTCGTTTATAACGAAGGA
TGCCAATAAAGCCATCGACCGAATTGTTAAAATGGAAAATTTCTCGCTCGAATCAAAAGT
TTAGATTTGTATTTCATTTAGCTGCAGTACTGATTTTTTTTTGTATTTGATCCATACTGA
TGTTAATCCATGGACTCTGAATCCATTCGATTGGTCTATAAATCCAATGATTACTCTCTA
GCACAAAGCCAAGCCAATTGGTAAATGCCACTGGCTTTATTGTTCTTTGTTTTATCCACC
ATACAATACTGCCCTTTCTTTCCCTGGTATCCAGGGATTTTATATCGTGTTGTTTTTAAA
GATATTGGTCTGTTGGTTTTTATTTCTTTTACAATCACATTATTATTTAAGTTGCTTTCT
CTAGTATTTACTCCCTTTATGATTTTCTGTACAGTTAGTTATAGATCAAATGAAAAATAT
TTTAGGAAATTCTTTTCTTTGAGCAGTAATGTGTAGTTAGTTGTTCTTTT

InterProScan

TIGRFAM
HAD-SF_hydro_IIA_CECR5 (IPR006353) - T[2-260] 6.6E-82
PANTHER
CECR5 (IPR029621) - T[2-346] 1.0E-135
SUPERFAMILY
HAD-like_sf (IPR036412) - T[12-85] 3.09E-19 - T[118-255] 3.09E-19 - T[282-298] 3.09E-19
Pfam
HAD-SF_hydro_IIA (IPR006357) - T[13-83] 3.8E-9
Gene3D
HAD_sf (IPR023214) - T[13-49] 2.8E-58 - T[50-209] 2.8E-58 - T[210-257] 2.8E-58 - T[284-300] 2.8E-58
TIGRFAM
HAD-SF_hydro_IIA (IPR006357) - T[13-255] 4.4E-44

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HDHD5_HUMAN 46.409 % 339 8.64E-115