- Transcript 'Cisavi.CG.ENS81.R19....' >
- Clone 'cima857864' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C8.611.v1....' >
- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.745970-755799.12476.t
Possible name(s)
HDHD5
Gene model
Location
R24 [746,356 / 755,793]
Amino acid sequence
Length: 400
>Cisavi.CG.ENS81.R24.745970-755799.12476.p
CKSQEPGFGLLFDIDGVLVRGKTPIPAAREMFKRLTNPDGRFKVPTVFVTNAGNALARTK
ADQLSNAMGVEITSEQVMMSHSPLRMFPEFHNKCVLMSGQGPLDQIAKKIGFTNYVTIDQ
IRDVFPNLDMVDHQRRPKLMSAALTETFPKIDAVILFGEPVRWETNLQIVIDVLLTHGNL
NDPIADDHENQIPILACNMDLLWMSDSHMPRFGHGTFLHCLESVYEKLVGRPLTYTALMG
KPSEVTYIYAEQLIKRIASNMGITSPIKNLYAIGDNPMADIYGANLFNKRIKQEQEVKQV
AWHVLMVACCQVSAEQTASSLQSWRQLHARNISTTCHSVLVCTGIYSPEPGGSSYQIPPV
FHGPRDMEFDVNLCVPSFITKDANKAIDRIVKMENFSLES
Nucleotide sequence
Length: 1,609
>Cisavi.CG.ENS81.R24.745970-755799.12476.t
TGTAAATCTCAGGAACCTGGATTTGGGTTGCTGTTTGACATTGATGGAGTGTTAGTACGT
GGCAAAACCCCAATACCAGCAGCTCGCGAAATGTTTAAGCGACTTACCAACCCAGATGGT
CGATTCAAAGTACCAACTGTGTTCGTCACTAATGCCGGCAACGCATTAGCTCGAACCAAA
GCCGATCAGTTGTCCAATGCAATGGGTGTAGAGATAACATCGGAACAAGTGATGATGTCA
CACAGCCCATTGAGGATGTTCCCAGAGTTCCACAACAAATGTGTTCTTATGTCGGGGCAA
GGACCCTTGGACCAAATCGCAAAGAAAATCGGATTCACAAATTATGTGACAATTGACCAA
ATACGTGACGTATTTCCTAATCTAGATATGGTCGATCATCAAAGGAGACCTAAATTGATG
TCAGCAGCTTTGACAGAAACATTCCCGAAAATTGACGCCGTCATTTTGTTTGGAGAGCCT
GTGAGGTGGGAGACAAACCTTCAAATTGTCATAGATGTCCTATTAACACACGGCAATTTG
AATGACCCAATCGCTGATGACCATGAGAACCAGATCCCAATATTGGCTTGTAATATGGAT
CTTCTATGGATGTCGGATTCTCATATGCCAAGGTTTGGTCACGGTACATTCCTTCACTGT
TTAGAGAGTGTGTATGAAAAGTTGGTTGGTCGACCCCTGACGTATACTGCACTTATGGGC
AAGCCGAGCGAAGTCACGTACATCTACGCTGAGCAGCTCATAAAGAGAATAGCTAGCAAT
ATGGGAATCACAAGTCCCATTAAAAACCTCTATGCAATTGGAGATAACCCGATGGCTGAC
ATCTATGGGGCCAATCTGTTTAACAAGCGAATCAAACAAGAACAGGAAGTGAAGCAGGTT
GCATGGCATGTACTAATGGTGGCATGTTGCCAGGTTTCTGCAGAGCAGACTGCTTCCTCT
CTACAATCATGGCGACAACTGCATGCTAGGAATATTAGCACAACTTGCCATTCTGTGCTT
GTGTGCACGGGTATCTACTCCCCGGAACCTGGGGGCAGTTCTTACCAAATTCCACCGGTA
TTCCACGGTCCCAGAGATATGGAGTTCGACGTCAATTTGTGCGTACCCTCGTTTATAACG
AAGGATGCCAATAAAGCCATCGACCGAATTGTTAAAATGGAAAATTTCTCGCTCGAATCA
AAAGTTTAGATTTGTATTTCATTTAGCTGCAGTACTGATTTTTTTTTGTATTTGATCCAT
ACTGATGTTAATCCATGGACTCTGAATCCATTCGATTGGTCTATAAATCCAATGATTACT
CTCTAGCACAAAGCCAAGCCAATTGGTAAATGCCACTGGCTTTATTGTTCTTTGTTTTAT
CCACCATACAATACTGCCCTTTCTTTCCCTGGTATCCAGGGATTTTATATCGTGTTGTTT
TTAAAGATATTGGTCTGTTGGTTTTTATTTCTTTTACAATCACATTATTATTTAAGTTGC
TTTCTCTAGTATTTACTCCCTTTATGATTTTCTGTACAGTTAGTTATAGATCAAATGAAA
AATATTTTAGGAAATTCTTTTCTTTGAGCAGTAATGTGTAGTTAGTTGT
| TIGRFAM |
HAD-SF_hydro_IIA_CECR5 (IPR006353) - T[8-290] 4.1E-94 |
| Pfam |
HAD-SF_hydro_IIA (IPR006357) - T[10-113] 6.5E-20 |
| SUPERFAMILY |
HAD-like_sf (IPR036412) - T[10-115] 8.65E-29 - T[148-285] 8.65E-29 |
| TIGRFAM |
HAD-SF_hydro_IIA (IPR006357) - T[11-285] 5.7E-55 |
| Gene3D |
HAD_sf (IPR023214) - T[11-79] 6.2E-68 - T[80-239] 6.2E-68 - T[240-301] 6.2E-68 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDHD5_HUMAN | 46.231 % | 368 | 3.05E-125 |