Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phfumi.CG.MTP2014.S3...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S94...' > 
  3. Transcript 'Boleac.CG.SB_v3.S47....' > 
  4. Transcript 'Cisavi.CG.ENS81.R24....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R24.745970-755799.12474.t

Possible name(s)

HDHD5

Gene model

Cisavi.CG.ENS81.R24.745970-755799

Location

R24 [745,969 / 755,384]

Sequences

Amino acid sequence

Length: 395

>Cisavi.CG.ENS81.R24.745970-755799.12474.p
FGLLFDIDGVLVRGKTPIPAAREMFKRLTNPDGRFKVPTVFVTNAGNALARTKADQLSNA
MGVEITSEQVMMSHSPLRMFPEFHNKCVLMSGQGPLDQIAKKIGFTNYVTIDQIRDVFPN
LDMVDHQRRPKLMSAALTETFPKIDAVILFGEPVRWETNLQIVIDVLLTHGNLNDPIADD
HENQIPILACNMDLLWMSDSHMPRFGHGTFLHCLESVYEKLVGRPLTYTALMGKPSEVTY
IYAEQLIKRIASNMGITSPIKNLYAIGDNPMADIYGANLFNKRIKQEQEVKQVGWLESAI
PVALATLVLPNKPTPFIREVEACHSVLVCTGIYSPEPGVSLNNPCSVGSYQIPPVFHGPR
DMEFDVNLCVPSFITKDANKAIDRIVKMENFSLES

Nucleotide sequence

Length: 1,300

>Cisavi.CG.ENS81.R24.745970-755799.12474.t
AATACGGGAATTAACAATGGCATCTTCAGCAAACAACATTCTTCGGGTTTGCCGAAACAG
AACTCAAAGAATTCTATCTGCAAAATGTTATTCGACTAAAAAACAAGAACCTGGATTTGG
GTTGCTGTTTGACATTGATGGAGTGTTAGTACGTGGCAAAACCCCAATACCAGCAGCTCG
CGAAATGTTTAAGCGACTTACCAACCCAGATGGTCGATTCAAAGTACCAACTGTGTTCGT
CACTAATGCCGGCAACGCATTAGCTCGAACCAAAGCCGATCAGTTGTCCAATGCAATGGG
TGTAGAGATAACATCGGAACAAGTGATGATGTCACACAGCCCATTGAGGATGTTCCCAGA
GTTCCACAACAAATGTGTTCTTATGTCGGGGCAAGGACCCTTGGACCAAATCGCAAAGAA
AATCGGATTCACAAATTATGTGACAATTGACCAAATACGTGACGTATTTCCTAATCTAGA
TATGGTCGATCATCAAAGGAGACCTAAATTGATGTCAGCAGCTTTGACAGAAACATTCCC
GAAAATTGACGCCGTCATTTTGTTTGGAGAGCCTGTGAGGTGGGAGACAAACCTTCAAAT
TGTCATAGATGTCCTATTAACACACGGCAATTTGAATGACCCAATCGCTGATGACCATGA
GAACCAGATCCCAATATTGGCTTGTAATATGGATCTTCTATGGATGTCGGATTCTCATAT
GCCAAGGTTTGGTCACGGTACATTCCTTCACTGTTTAGAGAGTGTGTATGAAAAGTTGGT
TGGTCGACCCCTGACGTATACTGCACTTATGGGCAAGCCGAGCGAAGTCACGTACATCTA
CGCTGAGCAGCTCATAAAGAGAATAGCTAGCAATATGGGAATCACAAGTCCCATTAAAAA
CCTCTATGCAATTGGAGATAACCCGATGGCTGACATCTATGGGGCCAATCTGTTTAACAA
GCGAATCAAACAAGAACAGGAAGTGAAGCAGGTTGGTTGGTTAGAATCTGCCATTCCGGT
TGCTTTAGCTACCTTAGTGCTTCCTAACAAACCAACCCCATTCATACGAGAAGTTGAAGC
TTGCCATTCTGTGCTTGTGTGCACGGGTATCTACTCCCCGGAACCTGGGGTAAGTTTAAA
TAACCCATGTAGCGTTGGTTCTTACCAAATTCCACCGGTATTCCACGGTCCCAGAGATAT
GGAGTTCGACGTCAATTTGTGCGTACCCTCGTTTATAACGAAGGATGCCAATAAAGCCAT
CGACCGAATTGTTAAAATGGAAAATTTCTCGCTCGAATCA

InterProScan

TIGRFAM
HAD-SF_hydro_IIA_CECR5 (IPR006353) - T[1-282] 4.2E-94
Pfam
HAD-SF_hydro_IIA (IPR006357) - T[3-106] 6.3E-20
SUPERFAMILY
HAD-like_sf (IPR036412) - T[3-108] 7.08E-29 - T[141-278] 7.08E-29 - T[320-336] 7.08E-29
TIGRFAM
HAD-SF_hydro_IIA (IPR006357) - T[4-278] 5.5E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HDHD5_HUMAN 46.447 % 366 8.43E-125