- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.311740-319668.09393.t
Possible name(s)
SLC6A1; SLC6A11; SLC6A8
Gene model
Location
R24 [311,754 / 319,668]
Amino acid sequence
Length: 555
>Cisavi.CG.ENS81.R24.311740-319668.09393.p
RETWAGKHEFILALVGYSVGLGNVWRFPYLCYDNGGGAFLIPYLIFVLLAGIPLFFLEIS
LGQFTQQSCIEVWSRLAPSMKGVAYGSAVVNFMCAIYFVIVMSWSVLYLVHSCIPGDLPW
TTCGNWWNSEECRVADIRRNVTMLLNTTSCSRSNLTTSPEQEFWSNYVLRQTSGIENMGG
LDNWPLILCFIASWVVIYLCVFKGARTSGKVVYVTAIAPYVLLTILLVRGLTLEGAWDGV
VYFLKPDLSKLLDSKVWEQAGGQIFYSYGICFTVLYAFGSYNRFNNNCYKQSVILASTCS
LTSVFASLVVFSIIGHMSFVQGKSIECVATEGPGLVFQVYPVGLSLLPVPHLWSVLFFAT
LFMVGIDTQFAGVESCVTIFLDMWPQVGKGKYGREIVSALVCLLFMILGLPLLTNGGIYV
FQLFNNYAVSGIALLWLAFFQSIAIGWVYGVDRYFENVKSMVGYYPSRYFKFCYRFFAPG
ISLFIFIFYCVKYTRLTLGDYVFPDWANIVGWLFSLMSMLCVPAFFIAEIYKSKGSLYER
FIIIIVLRYEGHEFR
Nucleotide sequence
Length: 1,665
>Cisavi.CG.ENS81.R24.311740-319668.09393.t
AGGGAAACTTGGGCTGGAAAGCACGAATTCATTCTGGCATTGGTCGGATATTCTGTGGGA
CTTGGCAATGTGTGGAGATTTCCTTATCTTTGCTACGATAATGGAGGAGGTGCATTCCTG
ATTCCGTATCTGATATTTGTTCTGTTGGCCGGGATTCCGCTATTCTTTCTGGAGATATCC
CTGGGCCAGTTCACCCAACAGAGCTGCATCGAAGTTTGGAGTCGTTTGGCGCCTTCTATG
AAGGGCGTCGCATATGGCTCGGCGGTTGTGAACTTCATGTGTGCGATATACTTCGTCATC
GTAATGTCGTGGTCGGTCTTGTACCTTGTTCACTCATGCATACCCGGCGACCTTCCATGG
ACAACTTGCGGTAATTGGTGGAACAGCGAAGAATGCAGAGTCGCTGATATCCGGAGAAAC
GTCACGATGCTATTAAATACAACCTCCTGCAGTCGCAGCAACTTGACTACGTCACCGGAG
CAAGAATTTTGGAGCAATTATGTCTTGCGCCAAACATCTGGTATTGAAAACATGGGGGGC
TTGGACAACTGGCCACTTATTCTGTGTTTTATCGCCTCTTGGGTGGTCATCTATCTGTGC
GTTTTCAAAGGAGCTCGTACGAGTGGAAAGGTGGTTTACGTGACTGCGATCGCACCTTAT
GTCTTACTCACAATCCTGTTAGTCCGGGGACTTACGTTGGAAGGTGCATGGGACGGCGTT
GTGTACTTCCTCAAGCCTGACTTATCGAAACTACTGGATTCAAAGGTATGGGAACAAGCA
GGAGGGCAGATATTCTATTCGTACGGCATCTGCTTCACAGTGTTGTATGCGTTCGGGAGC
TACAATCGCTTCAACAATAATTGCTACAAACAATCAGTGATCCTGGCTTCGACGTGCAGT
CTCACTTCGGTATTCGCATCGCTTGTTGTATTCAGTATCATCGGGCATATGTCGTTTGTG
CAAGGAAAGAGCATCGAATGCGTTGCCACTGAGGGACCAGGGTTGGTGTTCCAGGTGTAC
CCGGTTGGGCTGTCCCTGCTTCCAGTGCCGCATCTCTGGTCGGTTCTATTCTTTGCCACA
CTATTCATGGTTGGCATCGATACCCAGTTTGCTGGCGTTGAGAGCTGTGTGACCATCTTC
TTGGACATGTGGCCCCAAGTTGGAAAGGGGAAATACGGGAGAGAAATTGTTTCAGCTCTT
GTCTGTCTTCTCTTCATGATCCTGGGCCTCCCTCTGCTAACCAACGGTGGAATATACGTC
TTCCAGCTATTCAACAATTACGCCGTGAGTGGGATCGCGTTACTGTGGCTCGCTTTCTTC
CAATCAATAGCAATCGGCTGGGTGTATGGTGTCGATCGGTACTTCGAAAACGTGAAATCC
ATGGTTGGCTACTACCCGTCGCGCTACTTCAAGTTCTGCTACAGATTCTTTGCACCAGGG
ATCTCTCTGTTCATATTTATCTTCTACTGCGTCAAATACACTCGTTTAACGCTTGGGGAT
TATGTCTTCCCGGATTGGGCGAACATTGTGGGTTGGTTGTTTTCCCTGATGTCGATGCTG
TGTGTTCCTGCATTCTTCATCGCGGAGATATACAAATCGAAAGGTTCTCTTTACGAGCGG
TTTATTATTATTATAGTTCTTCGATATGAAGGACACGAATTTCGT
| Pfam |
Na/ntran_symport (IPR000175) - T[1-531] 1.3E-189 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[1-544] 4.7E-210 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-531] 7.06E-161 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-535] 95.58 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[9-30] 7.8E-67 - T[38-57] 7.8E-67 - T[82-108] 7.8E-67 - T[211-228] 7.8E-67 - T[293-313] 7.8E-67 - T[347-366] 7.8E-67 - T[431-451] 7.8E-67 - T[471-491] 7.8E-67 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[25-39] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A8_HUMAN | 48.624 % | 486 | 1.94E-166 |
| S6A11_HUMAN | 45.941 % | 494 | 1.15E-169 |
| SC6A1_HUMAN | 44.404 % | 480 | 2.42E-164 |
