- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.311740-319668.09392.t
Possible name(s)
SLC6A1; SLC6A11; SLC6A8
Gene model
Location
R24 [311,739 / 319,095]
Amino acid sequence
Length: 566
>Cisavi.CG.ENS81.R24.311740-319668.09392.p
TNELNRETWAGKHEFILALVGYSVGLGNVWRFPYLCYDNGGGAFLIPYLIFVLLAGIPLF
FLEISLGQFTQQSCIEVWSRLAPSMKGVAYGSAVVNFMCAIYFVIVMSWSVLYLVHSCIP
GDLPWTTCGKLTSLLSVATATINKISTGCIRTRYTELHRYVSCSNVTMLLNTTSCSRSNL
TTSPEQEFWSNYVLRQTSGIENMGGLDNWPLILCFIASWVVIYLCVFKGARTSGKVVYVT
AIAPYVLLTILLVRGLTLEGAWDGVVYFLKPDLSKLLDSKVWEQAGGQIFYSYGICFTVL
YAFGSYNRFNNNCYKQSVILASTCSLTSVFASLVVFSIIGHMSFVQGKSIECVATEGPGL
VFQVYPVGLSLLPVPHLWSVLFFATLFMVGIDTQFAGVESCVTIFLDMWPQVGKGKYGRE
IVSALVCLLFMILGLPLLTNGGIYVFQLFNNYAVSGIALLWLAFFQSIAIGWVYGVDRYF
ENVKSMVGYYPSRYFKFCYRFFAPGISLFIFIFYCVKYTRLTLGDYVFPDWANIVGWLFS
LMSMLCVPAFFIAEIYKSKGSLYEVI
Nucleotide sequence
Length: 1,698
>Cisavi.CG.ENS81.R24.311740-319668.09392.t
ACTAATGAACTTAACAGGGAAACTTGGGCTGGAAAGCACGAATTCATTCTGGCATTGGTC
GGATATTCTGTGGGACTTGGCAATGTGTGGAGATTTCCTTATCTTTGCTACGATAATGGA
GGAGGTGCATTCCTGATTCCGTATCTGATATTTGTTCTGTTGGCCGGGATTCCGCTATTC
TTTCTGGAGATATCCCTGGGCCAGTTCACCCAACAGAGCTGCATCGAAGTTTGGAGTCGT
TTGGCGCCTTCTATGAAGGGCGTCGCATATGGCTCGGCGGTTGTGAACTTCATGTGTGCG
ATATACTTCGTCATCGTAATGTCGTGGTCGGTCTTGTACCTTGTTCACTCATGCATACCC
GGCGACCTTCCATGGACAACTTGCGGTAAGTTGACATCACTATTGTCGGTGGCCACAGCA
ACGATAAACAAGATATCAACGGGTTGTATTCGTACCCGTTATACTGAGCTGCACCGATAT
GTTTCTTGTTCAAACGTCACGATGCTATTAAATACAACCTCCTGCAGTCGCAGCAACTTG
ACTACGTCACCGGAGCAAGAATTTTGGAGCAATTATGTCTTGCGCCAAACATCTGGTATT
GAAAACATGGGGGGCTTGGACAACTGGCCACTTATTCTGTGTTTTATCGCCTCTTGGGTG
GTCATCTATCTGTGCGTTTTCAAAGGAGCTCGTACGAGTGGAAAGGTGGTTTACGTGACT
GCGATCGCACCTTATGTCTTACTCACAATCCTGTTAGTCCGGGGACTTACGTTGGAAGGT
GCATGGGACGGCGTTGTGTACTTCCTCAAGCCTGACTTATCGAAACTACTGGATTCAAAG
GTATGGGAACAAGCAGGAGGGCAGATATTCTATTCGTACGGCATCTGCTTCACAGTGTTG
TATGCGTTCGGGAGCTACAATCGCTTCAACAATAATTGCTACAAACAATCAGTGATCCTG
GCTTCGACGTGCAGTCTCACTTCGGTATTCGCATCGCTTGTTGTATTCAGTATCATCGGG
CATATGTCGTTTGTGCAAGGAAAGAGCATCGAATGCGTTGCCACTGAGGGACCAGGGTTG
GTGTTCCAGGTGTACCCGGTTGGGCTGTCCCTGCTTCCAGTGCCGCATCTCTGGTCGGTT
CTATTCTTTGCCACACTATTCATGGTTGGCATCGATACCCAGTTTGCTGGCGTTGAGAGC
TGTGTGACCATCTTCTTGGACATGTGGCCCCAAGTTGGAAAGGGGAAATACGGGAGAGAA
ATTGTTTCAGCTCTTGTCTGTCTTCTCTTCATGATCCTGGGCCTCCCTCTGCTAACCAAC
GGTGGAATATACGTCTTCCAGCTATTCAACAATTACGCCGTGAGTGGGATCGCGTTACTG
TGGCTCGCTTTCTTCCAATCAATAGCAATCGGCTGGGTGTATGGTGTCGATCGGTACTTC
GAAAACGTGAAATCCATGGTTGGCTACTACCCGTCGCGCTACTTCAAGTTCTGCTACAGA
TTCTTTGCACCAGGGATCTCTCTGTTCATATTTATCTTCTACTGCGTCAAATACACTCGT
TTAACGCTTGGGGATTATGTCTTCCCGGATTGGGCGAACATTGTGGGTTGGTTGTTTTCC
CTGATGTCGATGCTGTGTGTTCCTGCATTCTTCATCGCGGAGATATACAAATCGAAAGGT
TCTCTTTACGAGGTAATT
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[5-560] 95.244 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[6-137] 4.58E-156 - T[183-556] 4.58E-156 |
| Pfam |
Na/ntran_symport (IPR000175) - T[6-556] 6.9E-183 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[6-562] 2.7E-203 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[14-35] 9.0E-67 - T[43-62] 9.0E-67 - T[87-113] 9.0E-67 - T[236-253] 9.0E-67 - T[318-338] 9.0E-67 - T[372-391] 9.0E-67 - T[456-476] 9.0E-67 - T[496-516] 9.0E-67 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[30-44] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A8_HUMAN | 47.5 % | 478 | 3.6E-163 |
| S6A11_HUMAN | 43.316 % | 475 | 8.72E-162 |
| SC6A1_HUMAN | 42.527 % | 461 | 5.97E-157 |
