- Transcript 'KH2012:KH.L137.2.v2....' >
- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'Cisavi.CG.ENS81.R24....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R24.205926-211253.07774.t
Possible name(s)
LRP1B; PRKCSH; SORL1
Gene model
Location
R24 [205,925 / 211,253]
Amino acid sequence
Length: 351
>Cisavi.CG.ENS81.R24.205926-211253.07774.p
MVCVMVISVLVLVHAAYAGDGLRIRGVSLTKNSLYNPDRDFTCFDGSKSFQFSLVNDDYC
DCTDGSDEPGTSACPNGSFHCPNPGYRPANIPSSRVNDGVCDCCDGSDEWKNTQKCQNTC
NELWIAEKQRLAEENEAANIGIKLKEEFSKTGLSKKAERQAKVAELETKLEELSAKEEDL
KISKEEIESREATALEEHRRVKEEQRLKEAHEDNLKRGAEAFSEMDSDKDAILVPAELVL
HSELDPDTSDSEFTAAEAEVMLQADSVDLNYFLTNVWPMINSTFQTTLAPPVEQQEQENQ
EVKTEEDLGEDDILRGEVVDEEDYYEDEEETDQEDHQEEEEAEEEGPSSGP
Nucleotide sequence
Length: 1,779
>Cisavi.CG.ENS81.R24.205926-211253.07774.t
AATCAATTTGTTGCAATGGTTTGTGTGATGGTAATATCAGTGCTTGTGTTGGTTCACGCA
GCATATGCAGGAGATGGGCTTCGTATCAGAGGAGTTTCATTGACAAAAAACAGCTTGTAC
AACCCAGATCGTGACTTCACCTGCTTTGATGGAAGCAAATCATTTCAATTTTCGTTAGTC
AACGATGATTATTGCGATTGCACTGACGGCTCTGATGAGCCTGGGACGTCGGCTTGCCCC
AACGGTTCATTTCATTGTCCTAATCCTGGGTACCGGCCTGCCAATATCCCATCTTCCCGA
GTTAATGACGGAGTTTGCGATTGCTGTGATGGAAGTGATGAATGGAAGAATACTCAAAAA
TGCCAAAACACTTGCAATGAATTGTGGATCGCGGAAAAACAAAGACTTGCAGAAGAAAAT
GAAGCAGCTAACATAGGGATCAAACTGAAAGAAGAATTTTCAAAGACTGGACTTTCCAAG
AAAGCTGAAAGACAGGCAAAGGTTGCAGAGCTGGAGACAAAGCTGGAGGAGTTGTCGGCG
AAAGAAGAAGATCTGAAGATTTCAAAGGAGGAGATCGAGTCCAGGGAGGCAACGGCTTTG
GAGGAGCACAGACGAGTGAAGGAAGAGCAGAGATTGAAGGAAGCACACGAGGACAACTTG
AAGCGGGGAGCAGAGGCATTTTCAGAAATGGATTCTGACAAAGATGCGATATTGGTCCCT
GCTGAGCTGGTACTCCACAGCGAACTTGATCCAGACACCTCCGATTCGGAATTCACTGCT
GCGGAGGCTGAGGTAATGCTGCAAGCGGATTCTGTTGATTTAAACTACTTCCTCACCAAC
GTGTGGCCGATGATCAACTCAACATTCCAAACCACATTGGCTCCCCCTGTTGAACAGCAG
GAGCAGGAGAACCAGGAGGTTAAAACCGAGGAGGACCTTGGGGAAGATGATATCCTGAGA
GGAGAGGTTGTAGATGAAGAGGATTATTATGAGGATGAGGAGGAGACAGATCAGGAGGAT
CATCAGGAAGAGGAGGAAGCAGAAGAGGAAGGTCCCTCCAGCGGTCCCTAGTGGCGAATA
CAGTGCTGAAACGCAACAGATTGTTGACGAAGCGAACTCTGCAAGAGAAACATTCCGCAA
ACACCAGGCTGATAAGAAGAGTGTGGAGAGTGAAATTCAGACCTTAAAGACCGGCCTGGA
GTTGGACTTTGGTCCCGATGAGTCCTATCAAGCGCTCCAGTTCCAGTGCTATGAGCTGCA
CACCTTGGAGTACATCTACAAGGTGTGTCCGTTCGACCGAACTTCTCAAAGTCCGAAGAG
TGGAGGATCAGAAACCAATCTCGGTCGATGGGGACGATGGTCGGGTGTAGCGGAAGACAA
GTATTCTCGCATGCAATACGACAACGGATTGACGTGTTGGAACGGACCTGCAAGAACCAC
CGAGGTTCGGCTTAAATGTGGAGTCGATCACAAGTTATTATCAGTCGATGAGCCTTCCAG
GTGTTCGTACGTCTTCGAGTTCGCCACCCCATGCGCCTGCCGACCCACCACACATGAACA
CCCCCGAGACGAACTTTGAAATGAAGCACTTACGAACTATTACACTAGATTCTATATTTT
GTGGGAATTCGTTGCAGAAGGTCTTCAAACGTACAATTTCCGACCCAACTTTTTTGTTTG
GAAACTTTTGTCTTGTGCTTCTAGCATCACACTCCGCAGTAACCAAGGAAGTTCAATCAA
TGTATTGTTGACGCAATTAAATAGTGACACGGTTCCATG
| PANTHER |
Glucosidase_2_bsu (IPR026874) - T[4-340] 8.7E-67 |
| Pfam |
PRKCSH_N (IPR028146) - T[13-173] 5.6E-45 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[73-117] 8.887 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[73-111] 9.42E-5 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[74-110] 2.01391E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLU2B_HUMAN | 43.494 % | 223 | 2.86E-68 |