Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R23....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R23.868760-872175.00269.t

Possible name(s)

SNIP1

Gene model

Cisavi.CG.ENS81.R23.868760-872175

Location

R23 [868,900 / 872,175]

Sequences

Amino acid sequence

Length: 409

>Cisavi.CG.ENS81.R23.868760-872175.00269.p
ISEEMHKNHRKGEQKKQKTQNLGEVKQVSVSKQRRRNSSSDSDSSSDSNSELSGNKNHKH
PNDRAGRSIEKCRKENTENSRKKGKRSRSTSESGSSSSSDSSDDNEQLKRTKEKSHRHKS
KKENNETEKGQREIKEYSNSSDSSQERNPKSKKRSQNQSKSKRDRIPEKRPREDARKEVS
DRRRNKSRERRRNSLDRSQERMSHNRSRNREDGYSNGAGEVEEAFKKEEEKVEKEKPNLG
LSGALTADTNTFKGVVIKYNEPPEARVPKKRWRLYPFKGTENLKASLILHLHRQSAYLLG
RLRRIADIPIDHPSCSKQHAVFQFRLVLLMDIVVDGVKKRRVKPYIIDLGSANGTYVNNE
RIEAQRYLELKEKDLLKFGFSSREYVLLHDKADTTEIGSDENEEEDEQD

Nucleotide sequence

Length: 1,230

>Cisavi.CG.ENS81.R23.868760-872175.00269.t
ATTTCTGAGGAAATGCATAAAAATCATCGAAAAGGTGAACAAAAGAAACAAAAAACTCAA
AATTTGGGAGAAGTTAAGCAAGTTTCTGTGTCAAAACAAAGAAGAAGAAACTCGAGTTCT
GATTCTGATAGTTCTTCTGATTCAAATTCAGAATTAAGTGGAAACAAAAATCACAAACAC
CCCAATGATAGAGCAGGTCGTTCGATCGAAAAATGTAGGAAGGAAAATACAGAAAATTCA
AGAAAAAAGGGCAAAAGGAGCAGAAGTACAAGTGAATCTGGTTCCTCTTCGTCTTCTGAT
TCTAGCGATGACAATGAACAGCTAAAGCGAACCAAAGAAAAATCTCACAGACATAAAAGT
AAAAAAGAGAATAATGAAACAGAAAAGGGGCAAAGGGAAATAAAAGAGTATTCTAACTCT
TCTGATTCTAGTCAGGAACGAAATCCTAAGTCGAAAAAGAGATCTCAAAATCAAAGCAAA
TCTAAGCGTGACAGAATCCCAGAAAAACGCCCAAGAGAAGATGCAAGAAAAGAAGTTTCT
GACAGAAGAAGAAATAAATCAAGGGAAAGAAGACGTAATTCCTTGGACAGAAGTCAAGAA
CGAATGTCACATAATCGCTCAAGAAATCGGGAAGATGGTTATTCGAACGGAGCAGGAGAA
GTGGAGGAGGCTTTCAAAAAGGAGGAGGAAAAGGTGGAAAAGGAGAAGCCAAACTTAGGA
CTATCCGGTGCACTTACAGCAGACACCAACACGTTTAAAGGGGTGGTAATTAAGTATAAT
GAACCTCCTGAGGCAAGGGTGCCCAAGAAAAGGTGGCGACTTTACCCCTTTAAAGGAACT
GAAAATTTAAAGGCAAGTTTGATTCTCCACCTGCATCGACAGAGTGCTTATTTATTAGGT
CGGCTGCGAAGGATAGCAGACATTCCCATTGACCATCCTTCCTGCTCTAAGCAACATGCA
GTTTTTCAATTCCGGTTAGTCCTATTAATGGACATTGTGGTGGATGGGGTTAAGAAGCGC
AGAGTAAAGCCGTACATAATCGATCTTGGCTCAGCTAACGGGACATACGTGAACAATGAA
AGAATAGAAGCTCAGAGATATTTGGAGTTAAAAGAGAAAGACCTTCTCAAATTCGGCTTC
AGCTCTCGGGAATACGTGCTGCTGCATGATAAAGCTGATACGACGGAGATTGGAAGTGAT
GAAAATGAGGAAGAAGATGAGCAAGATTAA

InterProScan

SUPERFAMILY	SMAD_FHA_dom_sf (IPR008984) - T[250-391] 3.73E-25
CDD	FHA_dom (IPR000253) - T[271-379] 7.10786E-22
SMART	FHA_dom (IPR000253) - T[296-362] 5.1E-12
Pfam	FHA_dom (IPR000253) - T[297-379] 2.6E-16
ProSiteProfiles	FHA_dom (IPR000253) - T[297-362] 11.263

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNIP1_HUMAN	73.099 %	269	7.99E-87