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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Clone 'cicl026a24' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Cisavi.CG.ENS81.R234...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R234.137830-142631.02975.t

Possible name(s)

RPL18A

Gene model

Cisavi.CG.ENS81.R234.137830-142631

Location

R234 [139,621 / 141,269]

Sequences

Amino acid sequence

Length: 189

>Cisavi.CG.ENS81.R234.137830-142631.02975.p
CMLFQLSEYKVVGRKLPSDAVPNPPLYRMRLFAPNHIAAKSRFCTAAISKCLTACAYYIS
YYKKIKKNAGEILQCSKRSEKRPGRVKNFGIWLRYDSRSGTHNMYREYRDVKVASAVTAC
YRDMGARHRARPGSIQIMRVEEVAANKCKRKHVQQFHDSKIKFPMRRTVLSKKRQNAPRF
TANKPNLFF

Nucleotide sequence

Length: 591

>Cisavi.CG.ENS81.R234.137830-142631.02975.t
TGTATGTTGTTTCAGCTGAGTGAATACAAGGTTGTGGGGCGTAAACTCCCATCCGACGCC
GTCCCCAACCCACCCTTGTATCGCATGCGATTGTTCGCACCAAACCATATCGCTGCAAAG
TCAAGATTCTGTACCGCTGCAATTTCAAAATGCCTCACTGCATGTGCGTATTACATTTCT
TACTACAAGAAGATCAAGAAGAATGCTGGTGAAATCCTTCAATGCAGCAAACGCTCGGAG
AAACGGCCGGGTCGGGTAAAGAACTTCGGAATCTGGTTGAGATACGACTCGCGTAGTGGA
ACACACAACATGTACAGGGAATACCGCGACGTTAAAGTTGCAAGCGCCGTGACTGCATGT
TACCGTGACATGGGAGCTCGACATCGTGCAAGACCTGGTTCCATACAAATCATGCGTGTG
GAAGAAGTCGCTGCCAACAAGTGCAAGCGAAAGCACGTGCAGCAGTTCCACGATTCGAAA
ATTAAATTCCCGATGCGAAGAACAGTGCTAAGCAAAAAGCGACAAAACGCTCCGCGCTTT
ACCGCCAATAAACCAAATCTGTTCTTCTAAGAATTGAACAGAAACTTCATA

InterProScan

PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[2-189] 3.2E-59
PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[6-189] 1.8E-74
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[7-141] 3.5E-46
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[29-141] 31.435

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 64.13 % 236 1.43E-80