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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R17....' > 
  2. Transcript 'Boleac.CG.SB_v3.S25....' > 
  3. Clone 'ma200n17' > 
  4. Transcript 'KH2012:KH.C5.392.v1....' > 
  5. Transcript 'Cisavi.CG.ENS81.R234...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R234.137830-142631.02974.t

Possible name(s)

RPL18A

Gene model

Cisavi.CG.ENS81.R234.137830-142631

Location

R234 [139,614 / 142,631]

Sequences

Amino acid sequence

Length: 178

>Cisavi.CG.ENS81.R234.137830-142631.02974.p
MKAKGELSEYKVVGRKLPSDAVPNPPLYRMRLFAPNHIAAKSRFWYYISYYKKIKKNAGE
ILQCSKRSEKRPGRVKNFGIWLRYDSRSGTHNMYREYRDVKVASAVTACYRDMGARHRAR
PGSIQIMRVEEVAANKCKRKHVQQFHDSKIKFPMRRTVLSKKRQNAPRFTANKPNLFF

Nucleotide sequence

Length: 598

>Cisavi.CG.ENS81.R234.137830-142631.02974.t
TTTTCTTTTTGGTTGTTTCTTAAGCCCAGTAACATGAAGGCAAAGGGAGAGCTGAGTGAA
TACAAGGTTGTGGGGCGTAAACTCCCATCCGACGCCGTCCCCAACCCACCCTTGTATCGC
ATGCGATTGTTCGCACCAAACCATATCGCTGCAAAGTCAAGATTCTGGTATTACATTTCT
TACTACAAGAAGATCAAGAAGAATGCTGGTGAAATCCTTCAATGCAGCAAACGCTCGGAG
AAACGGCCGGGTCGGGTAAAGAACTTCGGAATCTGGTTGAGATACGACTCGCGTAGTGGA
ACACACAACATGTACAGGGAATACCGCGACGTTAAAGTTGCAAGCGCCGTGACTGCATGT
TACCGTGACATGGGAGCTCGACATCGTGCAAGACCTGGTTCCATACAAATCATGCGTGTG
GAAGAAGTCGCTGCCAACAAGTGCAAGCGAAAGCACGTGCAGCAGTTCCACGATTCGAAA
ATTAAATTCCCGATGCGAAGAACAGTGCTAAGCAAAAAGCGACAAAACGCTCCGCGCTTT
ACCGCCAATAAACCAAATCTGTTCTTCTAAGAATTGAACAGAAACTTCATACTTGAAA

InterProScan

PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[1-178] 1.2E-83
PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[1-178] 1.3E-66
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[8-130] 1.1E-50
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[30-130] 35.841

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 69.101 % 259 1.5E-89