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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S7...' > 
  2. Transcript 'Boleac.CG.SB_v3.S849...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Harore.CG.MTP2014.S2...' > 
  5. Transcript 'Cisavi.CG.ENS81.R234...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R234.137830-142631.02972.t

Possible name(s)

RPL18A

Gene model

Cisavi.CG.ENS81.R234.137830-142631

Location

R234 [137,829 / 142,631]

Sequences

Amino acid sequence

Length: 178

>Cisavi.CG.ENS81.R234.137830-142631.02972.p
MKAKGELSEYKVVGRKLPSDAVPNPPLYRMRLFAPNHIAAKSRFWYYISYYKKIKKNAGE
ILQCSKRSEKRPGRVKNFGIWLRYDSRSGTHNMYREYRDVKVASAVTACYRDMGARHRAR
PGSIQIMRVEEVAANKCKRKHVQQFQDSKIKFPMRRTVLSKKRQNAPRFTANKPNLFF

Nucleotide sequence

Length: 591

>Cisavi.CG.ENS81.R234.137830-142631.02972.t
TTTTCTTTTTGGTTGTTTCTTAAGCCCAGTAACATGAAGGCAAAGGGAGAGCTGAGTGAA
TACAAGGTTGTGGGGCGTAAACTCCCATCCGACGCCGTCCCCAACCCACCCTTGTATCGC
ATGCGATTGTTCGCACCAAACCATATCGCTGCAAAGTCAAGATTCTGGTATTACATTTCT
TACTACAAGAAGATCAAGAAGAATGCTGGTGAAATCCTTCAATGCAGCAAACGCTCGGAG
AAACGGCCGGGTCGGGTAAAGAACTTCGGAATCTGGTTGAGATACGACTCGCGTAGTGGA
ACACACAACATGTACAGGGAATACCGCGACGTTAAAGTTGCAAGCGCCGTGACTGCATGT
TACCGTGACATGGGAGCTCGACATCGTGCAAGACCTGGTTCCATACAAATCATGCGTGTG
GAAGAAGTCGCTGCCAACAAGTGCAAGCGAAAGCACGTGCAGCAGTTCCAGGATTCGAAA
ATTAAATTCCCGATGCGAAGAACAGTGCTAAGCAAAAAGCGACAAAACGCTCCGCGCTTT
ACCGCCAATAAACCAAATCTGTTCTTCTAAGAATTGAACAGAAACTTCAAA

InterProScan

PIRSF
Ribosomal_L18a/L20_eukaryotes (IPR021138) - T[1-178] 3.3E-66
PANTHER
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[1-178] 1.1E-82
Pfam
Ribosomal_L18a//L18Ae/LX (IPR023573) - T[8-130] 1.1E-50
Hamap
50S_L18Ae/Ribosomal_L18a/L20 (IPR028877) - T[30-130] 35.841

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL18A_HUMAN 68.539 % 256 1.15E-88