- Transcript 'KH2012:KH.C6.236.v1....' >
- Region 'REG00000416' >
- Transcript 'KH2012:KH.C3.330.v2....' >
- Transcript 'Cisavi.CG.ENS81.R23....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R23.1415442-1425720.00438.t
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
R23 [1,415,441 / 1,420,389]
Amino acid sequence
Length: 451
>Cisavi.CG.ENS81.R23.1415442-1425720.00438.p
FKDVAGMKEAKEEVMEFVHFLKKPSEYKRLGAKMPKGCLLTGPPGVGKTLLAKAVASESG
VPFIPKSGSDFVEMIGGLGAKRVRDLFQEAREMAPCIIYIDELDAIGAKRGKNSFGGSDE
KDQTLNQILVEMDGMLSAQHDVIVLASTNRPDILDSAILRPGRFDRHIYIHLPSKSERKE
ILDRHLSDVKLEKPPTEYSEQLAAVTPGMSGADLANIANMAAIQAATEGDKVVKAKHLDY
AVERVIAGAPKSSTAVSPKEQEIVATHESGHALIGWLLEHTDVLAKVSIIPRTNAALGFS
RSVPSDRYLHTQEQMDDNMCMALGGRAAEDLIFGNFTQGAQDDLRKVTDMAYAQVQKFGF
NPVVGPLSFTEQEGFSLRPYSEHLANTMDQEVRTTVKAAYERAKEVLGRNRDLLVMLSKE
LLQKETLNYEDVVDIIGPPLHSGKAQVPTWW
Nucleotide sequence
Length: 1,353
>Cisavi.CG.ENS81.R23.1415442-1425720.00438.t
TTCAAAGATGTTGCTGGTATGAAGGAAGCAAAAGAGGAAGTTATGGAATTTGTTCATTTT
TTAAAGAAACCCTCTGAATACAAGCGACTTGGTGCAAAAATGCCGAAGGGCTGCTTACTC
ACTGGGCCACCAGGAGTGGGTAAAACATTGCTCGCGAAGGCAGTGGCTTCAGAATCGGGG
GTTCCGTTTATCCCTAAATCGGGATCCGACTTTGTTGAAATGATCGGTGGTTTAGGTGCT
AAAAGAGTTCGTGATCTGTTCCAGGAAGCGCGGGAAATGGCGCCGTGTATAATATACATT
GATGAGCTGGACGCCATTGGGGCAAAACGGGGTAAAAACTCATTTGGGGGAAGCGATGAA
AAGGATCAGACATTGAATCAAATCCTGGTTGAGATGGATGGTATGTTGAGTGCGCAACAT
GATGTTATTGTCCTGGCATCAACCAACAGACCAGATATATTGGACAGTGCAATACTGAGA
CCCGGCCGATTCGACCGTCATATTTACATCCACTTACCCAGCAAGAGTGAGAGGAAAGAA
ATACTTGATCGTCACTTGAGTGATGTGAAGCTGGAGAAGCCACCGACGGAATATTCCGAA
CAACTTGCCGCAGTTACTCCTGGCATGAGTGGCGCAGATTTAGCCAACATAGCCAACATG
GCCGCCATACAAGCAGCGACAGAAGGAGATAAGGTTGTGAAGGCAAAACACCTGGATTAT
GCTGTGGAACGTGTAATTGCAGGAGCTCCGAAATCGTCAACTGCGGTTTCCCCCAAAGAG
CAGGAAATAGTGGCGACCCACGAATCGGGCCACGCACTCATCGGGTGGCTGCTGGAGCAC
ACTGATGTCTTGGCCAAAGTGTCAATCATACCACGCACCAACGCTGCGCTGGGATTTTCA
CGGAGTGTTCCAAGCGACCGATATCTGCACACCCAAGAACAGATGGATGACAACATGTGC
ATGGCATTGGGTGGACGTGCGGCTGAAGATCTTATTTTCGGCAACTTTACACAAGGAGCG
CAAGATGATTTGAGGAAGGTTACCGACATGGCTTATGCTCAGGTGCAAAAGTTCGGTTTC
AACCCAGTTGTTGGTCCCCTGTCATTCACTGAACAGGAAGGGTTCAGCTTAAGGCCATAC
AGCGAACACTTGGCTAATACTATGGATCAGGAAGTAAGAACCACTGTAAAAGCTGCGTAT
GAACGAGCAAAAGAAGTGTTGGGTCGAAATCGCGATTTGCTGGTCATGTTGTCGAAAGAA
CTTCTGCAGAAGGAAACACTGAATTACGAAGATGTTGTTGATATAATTGGACCTCCCCTA
CACAGTGGTAAAGCACAGGTACCTACATGGTGG
| TIGRFAM |
FtsH (IPR005936) - T[1-436] 2.7E-168 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1-268] 1.26E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[34-174] 1.1E-19 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[39-171] 7.7E-41 |
| Pfam |
Peptidase_M41 (IPR000642) - T[235-434] 3.0E-64 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[256-438] 3.92E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 57.33 % | 525 | 0 |
| AFG32_HUMAN | 52.144 % | 457 | 2.32E-154 |
| YMEL1_HUMAN | 40 % | 313 | 6.11E-99 |