- Transcript 'Cisavi.CG.ENS81.R2.3...' >
- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Region 'REG00000893' >
- Molecular Tool 'Prdm1-r.b mRNA (Ikeda 2017)' >
- Transcript 'Cisavi.CG.ENS81.R2.3...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R2.305036-327173.06275.t
Possible name(s)
EPHA4; EPHB1; EPHB2
Gene model
Location
R2 [305,583 / 327,173]
Amino acid sequence
Length: 972
>Cisavi.CG.ENS81.R2.305036-327173.06275.p
MKGNGLCLVLLSVIIASVRADTYILYDTKSATSDLNWALHPQTYGWEELSGRDVNGNTIR
YHQVCNVDEEEQDNWVRSPFIDARSAQRVYMDIEFSVMKCEECRETFALYYYQSSADIAT
STFPPWRENPYTKIDTLAAGERFDSSTVGAEGINRKTLVISPLSRRGFYVAAQDQGACMS
LMSLKLYYYYCPETTHNLAYFSRTLSGGEVASLVAQSGKCVSNSVYSNNEVPKYRCNSYG
EWRVPTGSCHCRAGYQPNEELTTCQGCSVGSYKPENGNIQCQACPAHSLTRSVGADHCSC
VDGYYRADGDSIHQACSRTPSQPKNITFTLNKTSVSMNWMEPVITGERSDIFYSVACQEC
ESGYKNCRSCPSTIQPSPSNLHHLTTTNAQLNNLKPYSHYSIKVGLQYILFVIPQVGKPP
AFQWVNISTSESGPPQIQRLRLVESGQTYFVVAWMSTPTPTTHLLEYQVRVFQNGHKIKD
INVRMNCVVYFGLTKGSKYIAKVRVRNGMGYGKFSNDLYVATSSAKGRSTAGLNPAVIGG
VMGVIAIVIIVIIVLFQETRGKHKSSQEQVSQCPRYLDPLIWRTYVDYRDPHNGVKEIAT
ELDQTKIKIECVIGRGRWCLTVCRGKLISGKTSIPVAVKRLKEGASLIDHTNFLREACTM
AQFDHPNIIQLKGVVTKSIPAMIITEFMENGSLDKFLQGKVNELTASRLLEMLRGIASGM
NYLSSIKYIHRDLAARNILVSSDLVCKVSDFGLSRTLENDPQATYTTQGGKIALRWTAPE
CIRFRQFTSASDVWSYGIVMWEVMSYGEKPYWDMSNEVVTEVLEDGYRLPAPENCPVSIH
NLMLKCWSYEAKRRPHPIEIIRTLDQFIKQPNLLLDTKSHDASAPLLNPDSPTSLNEVST
LDEWLDMVKLGKYRRSFHTNGINDLESLVHISESELDRLGITSPAHRTRLQGGISTLRQH
LGEFPNTRQPQV
Nucleotide sequence
Length: 3,001
>Cisavi.CG.ENS81.R2.305036-327173.06275.t
GGAAAATTTCAGTTTTTAGGCGAAGGCGTGTACCGGTTTAACTTTAGGAACGGCTGATTT
AAACGAAAATTATAATATACAAGAAATGAAAGGAAACGGATTATGTTTGGTGCTACTTTC
TGTGATTATTGCCTCTGTACGAGCAGACACATATATATTGTACGACACCAAATCGGCTAC
AAGTGACTTGAATTGGGCGCTCCACCCACAAACTTATGGGTGGGAAGAACTAAGCGGACG
TGACGTCAACGGAAACACGATAAGATACCACCAAGTGTGCAATGTGGACGAAGAGGAACA
AGATAACTGGGTTCGGTCGCCATTTATTGACGCAAGATCGGCTCAACGTGTTTACATGGA
CATTGAGTTTTCCGTAATGAAATGCGAGGAATGTCGTGAAACATTCGCGCTGTATTACTA
CCAGTCGTCCGCTGACATCGCTACCAGCACTTTTCCACCGTGGAGGGAAAACCCCTATAC
CAAGATCGACACGCTAGCTGCAGGGGAACGATTTGACTCGAGCACTGTAGGTGCTGAGGG
GATAAACAGGAAGACTTTGGTGATCAGTCCGCTATCAAGGCGAGGGTTCTACGTGGCAGC
CCAGGACCAAGGAGCATGCATGTCGTTGATGAGTCTCAAGTTGTATTATTATTACTGCCC
TGAGACCACGCACAACCTCGCTTATTTCTCGAGGACCTTATCAGGGGGTGAAGTCGCGTC
GCTCGTTGCGCAATCCGGCAAATGCGTCTCCAACTCCGTATACTCTAACAACGAAGTTCC
GAAATACCGCTGCAACAGCTACGGTGAATGGAGAGTACCGACTGGTTCGTGCCACTGTCG
AGCTGGCTACCAACCGAACGAAGAACTAACTACGTGCCAAGGTTGCAGTGTGGGGAGTTA
CAAACCGGAGAATGGGAACATACAATGCCAAGCCTGCCCCGCACATAGCTTGACTAGGAG
CGTAGGGGCAGATCATTGTTCATGTGTGGATGGTTACTATCGAGCTGATGGAGACTCAAT
ACACCAAGCTTGTTCTAGGACACCATCTCAGCCAAAGAATATCACCTTTACATTGAACAA
AACTTCCGTTTCAATGAACTGGATGGAACCGGTTATAACTGGTGAAAGATCGGACATATT
TTACAGTGTGGCATGCCAGGAATGCGAGAGTGGGTACAAGAACTGCCGATCATGTCCCTC
CACCATCCAACCCTCCCCTTCCAACCTCCACCACCTCACAACCACCAACGCCCAACTCAA
TAACCTCAAACCATACTCTCATTATTCAATCAAGGTAGGTTTGCAATATATTTTATTTGT
CATCCCGCAAGTGGGGAAACCCCCTGCTTTTCAGTGGGTCAATATATCAACCAGCGAATC
AGGTCCACCCCAAATACAACGATTAAGGCTTGTAGAAAGTGGACAAACATATTTTGTGGT
GGCCTGGATGTCAACCCCCACGCCTACAACCCACTTGCTCGAATATCAAGTCAGAGTTTT
CCAAAACGGACACAAGATTAAAGACATAAACGTGAGAATGAATTGTGTAGTGTATTTTGG
GTTAACCAAGGGAAGCAAATACATCGCGAAGGTCAGAGTGAGAAATGGAATGGGATACGG
AAAATTCAGCAATGACCTTTACGTGGCCACTTCTTCGGCCAAAGGTAGATCGACTGCCGG
TTTAAACCCCGCAGTGATCGGGGGTGTGATGGGGGTGATCGCGATAGTTATCATCGTGAT
CATAGTGTTGTTCCAAGAAACTCGCGGAAAACACAAATCTTCTCAAGAGCAAGTTTCTCA
ATGTCCAAGGTACCTGGATCCACTGATTTGGCGCACCTACGTCGACTACCGAGACCCTCA
TAATGGGGTGAAGGAAATCGCAACCGAACTCGATCAAACTAAGATCAAGATCGAATGCGT
CATTGGGAGAGGTAGGTGGTGTTTAACAGTGTGCCGAGGAAAGTTGATATCGGGCAAGAC
TTCCATCCCGGTTGCCGTGAAACGCTTGAAGGAAGGAGCAAGTTTGATCGATCACACTAA
CTTCTTGAGGGAAGCTTGCACAATGGCTCAGTTTGATCATCCTAACATCATCCAACTTAA
AGGGGTCGTCACTAAAAGTATTCCAGCCATGATAATCACCGAGTTTATGGAGAATGGATC
ATTGGACAAGTTTCTACAGGGCAAAGTGAATGAACTGACTGCCTCGAGGTTGCTTGAGAT
GTTACGAGGTATAGCGAGTGGGATGAACTATCTCTCCTCCATCAAATACATCCACAGAGA
TCTTGCTGCTCGCAACATCCTCGTCAGTTCTGACCTCGTTTGCAAAGTTTCAGACTTCGG
ACTTTCGAGGACCCTGGAAAATGACCCCCAAGCTACCTATACTACACAGGGCGGGAAGAT
TGCTCTGCGCTGGACGGCACCCGAGTGCATACGCTTCCGACAATTCACGTCAGCGAGTGA
CGTATGGAGTTACGGCATCGTCATGTGGGAAGTGATGTCATACGGGGAGAAGCCATACTG
GGATATGAGCAATGAGGTGGTCACTGAGGTCTTGGAGGATGGATATCGCCTCCCAGCCCC
TGAGAACTGCCCAGTATCCATCCACAATCTGATGCTGAAGTGTTGGAGCTATGAAGCGAA
GAGGAGGCCTCATCCCATTGAGATCATCCGGACTTTGGATCAGTTCATCAAACAACCTAA
CCTCCTCCTGGACACCAAGTCACATGACGCAAGCGCCCCACTACTCAACCCAGACAGCCC
CACCAGTTTAAACGAGGTGTCCACACTTGATGAATGGCTGGACATGGTGAAGCTTGGAAA
ATATCGTCGAAGTTTCCACACGAATGGAATCAACGACCTTGAAAGTCTGGTCCACATTAG
TGAAAGTGAGTTAGATCGACTTGGCATCACCTCCCCCGCCCACCGCACTCGACTTCAGGG
AGGCATCAGCACGTTGAGGCAGCATTTGGGGGAATTCCCCAACACGAGACAACCGCAAGT
C
| PIRSF |
Tyr_kinase_ephrin_rcpt (IPR016257) - T[2-970] 0.0 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[4-191] 2.7E-60 |
| ProSiteProfiles |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[22-196] 54.428 |
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[23-189] 6.38E-55 |
| Pfam |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[24-191] 2.5E-57 |
| SMART |
Ephrin_rcpt_lig-bd_dom (IPR001090) - T[24-191] 4.2E-68 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[228-319] 2.67E-6 - T[357-373] 2.67E-6 |
| SMART |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[254-298] 1.9E-7 |
| Pfam |
Tyr-kin_ephrin_A/B_rcpt-like (IPR011641) - T[254-296] 1.7E-8 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[319-432] 10.067 - T[436-525] 11.006 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[319-523] 1.42E-20 |
| CDD |
FN3_dom (IPR003961) - T[320-404] 4.13604E-5 - T[434-522] 2.68614E-7 |
| SMART |
FN3_dom (IPR003961) - T[320-414] 0.45 - T[434-512] 8.9E-4 |
| Gene3D |
Ig-like_fold (IPR013783) - T[320-405] 2.7E-15 - T[420-531] 5.2E-10 |
| Pfam |
FN3_dom (IPR003961) - T[321-404] 3.8E-8 - T[436-515] 2.1E-5 |
| Pfam |
Eph_TM (IPR027936) - T[538-603] 1.7E-8 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[605-875] 3.83E-72 |
| SMART |
Tyr_kinase_cat_dom (IPR020635) - T[607-864] 7.5E-117 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[607-868] 34.45 |
| Pfam |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[608-863] 1.2E-87 |
| PRINTS |
Ser-Thr/Tyr_kinase_cat_dom (IPR001245) - T[685-698] 1.1E-30 - T[722-740] 1.1E-30 - T[772-782] 1.1E-30 - T[791-813] 1.1E-30 - T[835-857] 1.1E-30 |
| ProSitePatterns |
Tyr_kinase_AS (IPR008266) - T[728-740] . |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[889-959] 6.28E-16 |
| SMART |
SAM (IPR001660) - T[893-960] 1.6E-12 |
| ProSiteProfiles |
SAM (IPR001660) - T[896-960] 15.208 |
| Pfam |
SAM (IPR001660) - T[896-958] 6.6E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPHA4_HUMAN | 41.546 % | 746 | 0 |
| EPHB3_HUMAN | 41.916 % | 742 | 0 |
| EPHB2_HUMAN | 41.506 % | 769 | 0 |