- Transcript 'Cisavi.CG.ENS81.R21....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R21.679520-685989.07445.t
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
R21 [679,519 / 685,989]
Amino acid sequence
Length: 221
>Cisavi.CG.ENS81.R21.679520-685989.07445.p
MSSSSTKKVGSIFDREEEAPKRLQVDKRREVMRNRSMPASSAKDARKMFVAMDGNTGNKA
VGRKVGRSPTSVVPNANNIKQMLLKWCQAKTRGYEHVDITNFSGSWANGMAFCALVHNFF
PEAFDYASLDPKNRPKNFQLAFDAAEKYADADQLLDVDDMMLMGNRPDSKCVFTYVQSLY
NKLRRFEKPLTPLSPVIKVMGGISPTAKAIANEEAAGNPPR
Nucleotide sequence
Length: 1,067
>Cisavi.CG.ENS81.R21.679520-685989.07445.t
AAGAAAGAGCAAAACACCAAATCACTTTCAGACAAATACAGCGGATCAAGCTACACTTCG
ACCAGGAAGGAAATGTCGTCAAGTTCAACTAAGAAGGTGGGCAGTATCTTCGACCGCGAG
GAAGAAGCTCCGAAGCGACTCCAAGTGGACAAACGACGTGAAGTGATGCGGAACAGATCG
ATGCCTGCGTCATCAGCGAAGGACGCGCGGAAAATGTTCGTAGCGATGGACGGGAACACC
GGAAACAAGGCAGTTGGGCGGAAAGTGGGCAGAAGTCCGACATCTGTGGTCCCAAACGCA
AACAACATCAAGCAAATGTTGCTCAAGTGGTGCCAGGCTAAAACCCGAGGCTACGAGCAC
GTTGATATCACGAACTTCAGTGGAAGTTGGGCAAACGGGATGGCATTCTGCGCTCTCGTT
CATAACTTCTTCCCTGAAGCATTCGACTACGCGAGTTTGGACCCGAAAAACCGACCCAAG
AATTTCCAGCTTGCATTCGACGCGGCAGAGAAATACGCGGACGCTGACCAACTACTGGAT
GTGGATGATATGATGTTAATGGGAAACCGCCCTGATAGCAAATGCGTATTCACGTACGTC
CAGTCCTTATACAACAAACTCCGCCGCTTTGAGAAGCCCCTTACCCCACTCTCCCCTGTT
ATTAAAGTAATGGGGGGAATCTCACCCACCGCTAAAGCTATTGCGAACGAAGAAGCGGCG
GGAAACCCCCCAAGATAATACCTTCGTCACTCGTTCTTTTGACCTTTGTATATCATTGCT
CTTTTCTGTTTTCTACCCTGCATAGTATATATGAAGCATCGAAGCTCTGGTAATTAAATG
GGATTTAATTTAATCATCTATGAACCCTGTGGTTTAATAAGGACCACGGAAATCTTACAA
TCATCTCCAGAAATAGCCATTGCACGACGAACCGCTGCTAATCAACTTAAGCCCGTGGCG
TTCTTATTAATTTTTAGTCGCAGAGTTTTGAATCCTTGATTATTTTTGTTTCGCTTCCTA
ATCGATGAGCAATCTTGATTGTGACTGGAAATAAAATCTGAATCCGA
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[70-184] 1.96E-33 |
| Gene3D |
CH_dom_sf (IPR036872) - T[75-188] 2.7E-38 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[77-181] 12.858 |
| SMART |
CH-domain (IPR001715) - T[79-179] 3.5E-21 |
| Pfam |
CH-domain (IPR001715) - T[80-184] 2.3E-20 |
| CDD |
CH-domain (IPR001715) - T[80-184] 1.7853E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 57.732 % | 233 | 1.74E-71 |
| SMTL2_HUMAN | 53.254 % | 196 | 7.77E-61 |
| SMTL1_HUMAN | 64.486 % | 161 | 2.23E-47 |
