- Transcript 'Cisavi.CG.ENS81.R2.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R2.1347827-1356235.11852.t
Possible name(s)
SDHB
Gene model
Location
R2 [1,348,176 / 1,354,768]
Amino acid sequence
Length: 279
>Cisavi.CG.ENS81.R2.1347827-1356235.11852.p
MSSGLRISRTVLRSSSPVFSLLSSQCVRFSATAAAAQSTEQEPRLKTFSVYRWNPEGEGD
MKLPVMHKYKVDLNNCGPMVLDALIKIKNELDPTLTFRRSCREGICGVLMNIGGTNTLAC
LARIDTNLSKTTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDASKLGKENHQTV
EDRQKLDGLYECILCACCSTSCPSYWWSSDKYLGPAVLMQAYRWIIDSRDEFQKERLDRM
NDPFSLYKCHTIMNCTKACPKGLNPGLAIAELKKMLASH
Nucleotide sequence
Length: 944
>Cisavi.CG.ENS81.R2.1347827-1356235.11852.t
ATTATCATTTACGCAATTTAGTCCAAGTTTACATCAAAGGGAAAAAGTAATCGGCGTGTA
CAAAACACACATTTTTCAGACATAGGTTTAAAAAGTAAGAAAAAAACATGTCGTCTGGAT
TGAGAATTTCTCGTACAGTGCTGCGAAGTTCAAGTCCAGTATTTTCACTTCTGTCATCGC
AGTGTGTACGGTTTTCTGCGACAGCAGCTGCAGCACAGTCCACCGAACAAGAACCACGTT
TAAAAACATTCTCGGTTTACCGATGGAATCCGGAAGGTGAAGGCGATATGAAATTGCCAG
TCATGCACAAATATAAAGTGGACTTGAACAATTGTGGTCCTATGGTTTTGGATGCTCTTA
TCAAAATCAAGAATGAGCTGGACCCCACATTAACCTTCCGACGGTCATGCAGAGAAGGTA
TTTGCGGTGTGCTGATGAACATTGGAGGAACCAACACTCTGGCATGCTTAGCGCGAATTG
ATACAAATCTGTCAAAGACCACTAAGATATACCCATTACCCCACATGTATGTTGTAAAAG
ACCTTGTACCTGATATGAACAATTTTTATGCACAATACCGATCGATTGAGCCCTTCTTGA
AGCAGAAGGATGCCAGCAAACTTGGCAAGGAAAATCACCAAACTGTTGAAGACAGGCAAA
AGCTTGATGGGTTGTATGAGTGCATATTATGCGCGTGTTGTTCCACTTCGTGTCCCAGCT
ACTGGTGGAGCTCTGATAAATATCTCGGCCCAGCTGTGTTAATGCAGGCATACAGGTGGA
TTATAGACAGTAGAGATGAATTCCAGAAGGAAAGATTAGACCGAATGAATGACCCGTTTT
CCTTGTACAAATGCCACACAATTATGAACTGTACAAAAGCATGTCCAAAGGGCTTGAATC
CAGGCCTCGCCATTGCCGAGTTAAAAAAGATGTTAGCAAGCCAC
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[34-149] 3.9E-40 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[44-149] 2.94E-21 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[47-154] 6.7E-25 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[50-273] 1.6E-77 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[150-277] 4.36E-37 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[150-279] 2.2E-60 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[182-212] 7.601 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[192-203] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 68.519 % | 394 | 9.81E-140 |
