- Transcript 'Cisavi.CG.ENS81.R2.1...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R2.1347827-1356235.11851.t
Possible name(s)
SDHB
Gene model
Location
R2 [1,347,903 / 1,354,386]
Amino acid sequence
Length: 283
>Cisavi.CG.ENS81.R2.1347827-1356235.11851.p
MTIEVLSYFPLTFINYLFKYLSLLSAAAQSTEQEPRLKTFSVYRWNPEGEGDMKLPVMHK
YKVDLNNCGPMVLDALIKIKNELDPTLTFRRSCREGICGVLMNIGGTNTLACLARIDTNL
SKTTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDASKLGKENHQTVEDRQKLDG
LYECILCACCSTSCPSYWWSSDKYLGPAVLMQAYRWIIDSRDEFQKERLDRMNDPFSLYK
CHTIMNCTKACPKGLNPGLAIAELKKMLASHNSAEVSSPKPVA
Nucleotide sequence
Length: 1,086
>Cisavi.CG.ENS81.R2.1347827-1356235.11851.t
ATGACAATCGAAGTCTTATCTTATTTTCCGTTAACTTTTATCAACTACTTATTTAAATAC
CTGTCGTTATTGTCAGCTGCAGCACAGTCCACCGAACAAGAACCACGTTTAAAAACATTC
TCGGTTTACCGATGGAATCCGGAAGGTGAAGGCGATATGAAATTGCCAGTCATGCACAAA
TATAAAGTGGACTTGAACAATTGTGGTCCTATGGTTTTGGATGCTCTTATCAAAATCAAG
AATGAGCTGGACCCCACATTAACCTTCCGACGGTCATGCAGAGAAGGTATTTGCGGTGTG
CTGATGAACATTGGAGGAACCAACACTCTGGCATGCTTAGCGCGAATTGATACAAATCTG
TCAAAGACCACTAAGATATACCCATTACCCCACATGTATGTTGTAAAAGACCTTGTACCT
GATATGAACAATTTTTATGCACAATACCGATCGATTGAGCCCTTCTTGAAGCAGAAGGAT
GCCAGCAAACTTGGCAAGGAAAATCACCAAACTGTTGAAGACAGGCAAAAGCTTGATGGG
TTGTATGAGTGCATATTATGCGCGTGTTGTTCCACTTCGTGTCCCAGCTACTGGTGGAGC
TCTGATAAATATCTCGGCCCAGCTGTGTTAATGCAGGCATACAGGTGGATTATAGACAGT
AGAGATGAATTCCAGAAGGAAAGATTAGACCGAATGAATGACCCGTTTTCCTTGTACAAA
TGCCACACAATTATGAACTGTACAAAAGCATGTCCAAAGGGCTTGAATCCAGGCCTCGCC
ATTGCCGAGTTAAAAAAGATGTTAGCAAGCCACAACTCCGCTGAAGTGTCGTCGCCCAAA
CCAGTCGCCCAACAATAACTATTCTCGCGCACCAAACTGGTCATATCTGACCCCTTGCAA
ACTGTGCCCACTTCTAAAGCTTATTTTTAAATCAGATATTTCTGTCTAACTAAATAGTTG
ATGCACAATCTAATTGGATTGTAAGGTTTCAAGTTTTAAAAAACATGTTCCAGAAAGTTC
TCTTGTGTTCAAGAGCTTGCCCATTTGTATTAATCTTCGCGATGCGCGTCGTGTTAGAAG
TGTGAT
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[26-141] 4.0E-40 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[36-141] 3.23E-21 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[39-146] 6.9E-25 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[42-265] 1.7E-77 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[142-270] 3.31E-37 |
| Gene3D |
Helical_ferredxn (IPR009051) - T[142-282] 6.0E-61 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[174-204] 7.601 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[184-195] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 70.079 % | 390 | 2.8E-138 |
