- Transcript 'Mooccu.CG.ELv1_2.S51...' >
- Transcript 'Phmamm.CG.MTP2014.S3...' >
- EST 'AHC0AAA234YD19_RM1' >
- Transcript 'Boleac.CG.SB_v3.S151...' >
- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.755534-761541.11423.t
Possible name(s)
C1QTNF1; C1QTNF4; C1QTNF6
Gene model
Location
R19 [755,533 / 761,541]
Amino acid sequence
Length: 349
>Cisavi.CG.ENS81.R19.755534-761541.11423.p
MFILSSVFVTECRALASAVGGRDFSGGFGGNSTDVGVVAFSVARTRVLKGHKQTQSSVPF
DHEFVNTGGHFDLKSGVFTAPLSGAYEISFSGGAIPHRKMSLLLMKNNFEVQTLAYDGHS
RGNPRGQHQSLILQLEETDRIWLKLADSRGYAVSGTRSGSYVTSFSGHLLQATEMNDVIK
RKKRRKRRTSRTRRITRRDYDDTNQSRTMVAFSAACRRSVFGGESTGKDPSHDVTLTYDK
IFVNLGNALDAKTGVFTAPASGVYFFSFTVGKFPKKKLSVSLMKNDNLFQVMAYNEGNSR
FREMQSQSVMLQLLSGDTVWLKTYNSKEYAVYSNLGSYITFSGYLVAPL
Nucleotide sequence
Length: 1,125
>Cisavi.CG.ENS81.R19.755534-761541.11423.t
ATTATTTCGTAATGTTTATTTTAAGTTCGGTTTTCGTGACCGAGTGCCGGGCGCTCGCGT
CTGCGGTCGGTGGACGTGACTTTTCCGGCGGATTTGGTGGGAACTCTACCGATGTCGGGG
TCGTCGCCTTTTCAGTGGCGAGAACGCGTGTTTTGAAAGGACACAAGCAAACGCAAAGCT
CCGTACCGTTTGACCACGAATTCGTCAACACGGGCGGTCATTTCGACCTTAAAAGCGGAG
TCTTTACAGCGCCGCTGAGCGGTGCTTACGAAATTTCATTCAGCGGCGGCGCAATACCCC
ACCGCAAGATGTCGCTGCTGCTCATGAAAAACAACTTCGAAGTCCAGACGTTGGCGTATG
ACGGTCACTCCAGGGGGAACCCCCGAGGTCAACACCAAAGTTTGATACTTCAATTAGAAG
AAACAGACAGGATTTGGCTGAAGCTGGCTGACAGCCGCGGGTACGCTGTGAGTGGAACGC
GATCGGGTTCTTACGTCACATCCTTTTCCGGTCATTTGTTGCAAGCGACGGAAATGAATG
ACGTCATCAAAAGGAAGAAACGTCGTAAACGAAGAACAAGCAGGACAAGGAGAATAACGA
GAAGAGATTATGACGACACAAATCAATCGAGAACAATGGTCGCGTTTTCGGCGGCTTGTC
GTCGCAGCGTGTTCGGAGGGGAATCTACCGGAAAAGACCCTTCTCATGACGTCACACTGA
CTTATGATAAAATATTTGTGAATTTGGGGAATGCCCTTGACGCAAAAACCGGCGTGTTCA
CAGCGCCTGCTAGCGGCGTGTACTTCTTTAGTTTCACGGTCGGGAAATTCCCCAAAAAGA
AACTGTCAGTTTCACTGATGAAGAATGATAACTTGTTTCAAGTTATGGCTTACAACGAAG
GCAATTCACGCTTCCGAGAGATGCAAAGCCAGAGCGTGATGCTGCAGCTGCTCAGTGGCG
ACACCGTGTGGTTGAAAACGTACAACTCGAAGGAATACGCCGTGTACAGCAACCTCGGAA
GTTATATCACTTTCTCCGGCTACTTAGTAGCCCCGCTTTGATCGAATTGTGCGCAATTGT
TATGTGACTATCCATGAAGACATTAAACACAGATTTGCCATTCAA
| SMART |
C1q_dom (IPR001073) - T[31-173] 5.6E-9 - T[203-349] 4.1E-18 |
| ProSiteProfiles |
C1q_dom (IPR001073) - T[33-176] 25.397 - T[205-349] 37.981 |
| Gene3D |
Tumour_necrosis_fac-like_dom (IPR008983) - T[37-186] 4.3E-30 - T[209-349] 1.0E-36 |
| SUPERFAMILY |
Tumour_necrosis_fac-like_dom (IPR008983) - T[38-170] 2.19E-25 - T[209-348] 1.89E-33 |
| Pfam |
C1q_dom (IPR001073) - T[39-170] 3.6E-22 - T[229-346] 3.6E-29 |
| PRINTS |
C1q_dom (IPR001073) - T[229-255] 7.7E-14 - T[256-275] 7.7E-14 - T[303-324] 7.7E-14 - T[337-347] 7.7E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| C1QT1_HUMAN | 36.913 % | 79.3 | 8.33E-17 |
| C1QT6_HUMAN | 40.288 % | 89.7 | 9.68E-21 |
| C1QT4_HUMAN | 43.087 % | 217 | 1.94E-68 |