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- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.3883332-3905930.18483.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
R19 [3,891,643 / 3,905,254]
Amino acid sequence
Length: 489
>Cisavi.CG.ENS81.R19.3883332-3905930.18483.p
REAMRRYLKEPNDQTLTVLHAKVAQKSYGNEKRFFCPPPCMYLLGNGWKRKQQTLEEEEG
SVEAGQVHAFIGIGSSEQEMQQLHLDGKVAEVTPGAIIESARLFLKTSIHEPNPVLVHLL
CYNFCTAKTLYISDTDKRKHFMLNVKMFFGKGADVGQFCSKRIKVISKPSKKKQSLKNAD
LCIASGTKVALFNRLRSQTVSTRYLHVEKGNFHASSIQWGCFAIHLLDDDESESEEFSVM
DGYIHYGQTVKLVCSNTGMALPRLIIRKCITEAMLQIARRMTTQMLDKNQRNKIVDKQTA
ILDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEANKEMINDGASWTIIS
TDKAEYTFCDGMGPTADPVTPVPNVHSLQLNGGGDVAMLEVNGECFTSNLKVWFGEIEAD
TMFRCAEGLLCVVPDISAFREGWKWVKESVQVPINLVRNDGVIYPTNLTFTFTPEPGPRQ
HCPAALSIL
Nucleotide sequence
Length: 1,467
>Cisavi.CG.ENS81.R19.3883332-3905930.18483.t
AGGGAAGCGATGCGACGATACTTGAAAGAACCGAACGACCAAACGCTCACAGTGCTTCAC
GCAAAAGTGGCGCAGAAGTCATACGGAAACGAAAAACGGTTCTTCTGTCCTCCCCCATGC
ATGTATCTCCTGGGCAATGGCTGGAAGAGAAAGCAGCAAACCTTGGAGGAGGAAGAGGGC
TCCGTGGAGGCGGGGCAAGTCCATGCTTTCATCGGGATCGGGAGCAGCGAGCAAGAGATG
CAGCAACTTCATTTGGATGGGAAGGTGGCGGAGGTTACACCCGGGGCGATTATCGAATCC
GCCCGTCTCTTTCTCAAAACCTCTATACACGAACCTAACCCGGTGCTCGTACACCTTCTG
TGCTACAACTTCTGCACCGCCAAGACGTTGTACATATCCGACACTGACAAGCGAAAACAC
TTTATGCTCAACGTGAAGATGTTCTTCGGCAAAGGTGCTGATGTGGGTCAGTTCTGTAGC
AAGCGGATCAAAGTGATCAGCAAACCTTCAAAGAAGAAACAGTCGCTGAAGAACGCCGAC
TTGTGCATCGCATCTGGCACGAAAGTGGCTTTGTTCAACAGACTTCGCTCCCAGACAGTG
AGCACGAGGTATTTGCACGTGGAAAAGGGAAACTTCCACGCGAGCTCTATACAGTGGGGC
TGCTTCGCCATTCATTTGCTCGACGACGACGAATCGGAATCGGAGGAATTCTCAGTGATG
GACGGATACATCCACTATGGACAAACCGTCAAGTTGGTGTGTTCCAACACTGGGATGGCT
CTACCTCGACTCATAATACGAAAGTGTATCACTGAGGCAATGCTACAGATTGCCAGACGT
ATGACAACGCAAATGTTAGACAAAAACCAAAGAAACAAAATCGTGGACAAACAGACGGCG
ATATTGGACGCGGACGACCCGGTCTCCCAACTGCACAAGTGCGCCTTCTACTTGAAAGAT
ACGGAACGAATGTATCTCTGTCTCTCTCAGGAGCGGATTATACAGTTTCAGGCCACCCCA
TGCCCCAAGGAAGCCAACAAAGAAATGATCAACGACGGGGCCTCGTGGACCATCATCTCA
ACCGACAAGGCTGAATATACATTCTGCGATGGAATGGGACCGACCGCTGACCCAGTAACC
CCGGTACCCAACGTCCATAGTTTGCAGTTAAACGGCGGAGGCGACGTTGCAATGCTGGAA
GTGAACGGGGAATGTTTTACGTCCAACCTCAAAGTATGGTTCGGCGAGATAGAAGCCGAC
ACGATGTTCAGATGCGCCGAGGGACTCCTGTGTGTTGTCCCCGACATATCGGCGTTCAGG
GAGGGATGGAAGTGGGTCAAAGAGTCGGTCCAGGTCCCGATCAACCTTGTAAGGAACGAC
GGGGTGATTTACCCCACCAACCTTACCTTTACTTTCACCCCTGAACCCGGCCCCAGGCAG
CACTGCCCCGCTGCGCTTAGTATACTC
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-180] 4.72E-56 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[15-180] 4.9E-76 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[16-180] 1.2E-46 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[178-272] 2.09E-57 - T[299-361] 2.09E-57 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[181-356] 2.5E-78 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[181-356] 1.3E-66 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[362-474] 2.8E-35 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[378-474] 5.06533E-62 |
| Gene3D |
Ig-like_fold (IPR013783) - T[383-476] 1.0E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 70.961 % | 712 | 0 |
| RBPJL_HUMAN | 46.555 % | 448 | 4.94E-154 |