Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Boleac.CG.SB_v3.S2.g...'
  2. Transcript 'KH2012:KH.C9.608.v2....'
  3. Transcript 'Cisavi.CG.ENS81.R19....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.3883332-3905930.18483.t

Possible name(s)

RBPJ; RBPJL

Location

R19 [3,891,643 / 3,905,254]

Sequences

Amino acid sequence

Length: 489

>Cisavi.CG.ENS81.R19.3883332-3905930.18483.p
REAMRRYLKEPNDQTLTVLHAKVAQKSYGNEKRFFCPPPCMYLLGNGWKRKQQTLEEEEG
SVEAGQVHAFIGIGSSEQEMQQLHLDGKVAEVTPGAIIESARLFLKTSIHEPNPVLVHLL
CYNFCTAKTLYISDTDKRKHFMLNVKMFFGKGADVGQFCSKRIKVISKPSKKKQSLKNAD
LCIASGTKVALFNRLRSQTVSTRYLHVEKGNFHASSIQWGCFAIHLLDDDESESEEFSVM
DGYIHYGQTVKLVCSNTGMALPRLIIRKCITEAMLQIARRMTTQMLDKNQRNKIVDKQTA
ILDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEANKEMINDGASWTIIS
TDKAEYTFCDGMGPTADPVTPVPNVHSLQLNGGGDVAMLEVNGECFTSNLKVWFGEIEAD
TMFRCAEGLLCVVPDISAFREGWKWVKESVQVPINLVRNDGVIYPTNLTFTFTPEPGPRQ
HCPAALSIL

Nucleotide sequence

Length: 1,467

>Cisavi.CG.ENS81.R19.3883332-3905930.18483.t
AGGGAAGCGATGCGACGATACTTGAAAGAACCGAACGACCAAACGCTCACAGTGCTTCAC
GCAAAAGTGGCGCAGAAGTCATACGGAAACGAAAAACGGTTCTTCTGTCCTCCCCCATGC
ATGTATCTCCTGGGCAATGGCTGGAAGAGAAAGCAGCAAACCTTGGAGGAGGAAGAGGGC
TCCGTGGAGGCGGGGCAAGTCCATGCTTTCATCGGGATCGGGAGCAGCGAGCAAGAGATG
CAGCAACTTCATTTGGATGGGAAGGTGGCGGAGGTTACACCCGGGGCGATTATCGAATCC
GCCCGTCTCTTTCTCAAAACCTCTATACACGAACCTAACCCGGTGCTCGTACACCTTCTG
TGCTACAACTTCTGCACCGCCAAGACGTTGTACATATCCGACACTGACAAGCGAAAACAC
TTTATGCTCAACGTGAAGATGTTCTTCGGCAAAGGTGCTGATGTGGGTCAGTTCTGTAGC
AAGCGGATCAAAGTGATCAGCAAACCTTCAAAGAAGAAACAGTCGCTGAAGAACGCCGAC
TTGTGCATCGCATCTGGCACGAAAGTGGCTTTGTTCAACAGACTTCGCTCCCAGACAGTG
AGCACGAGGTATTTGCACGTGGAAAAGGGAAACTTCCACGCGAGCTCTATACAGTGGGGC
TGCTTCGCCATTCATTTGCTCGACGACGACGAATCGGAATCGGAGGAATTCTCAGTGATG
GACGGATACATCCACTATGGACAAACCGTCAAGTTGGTGTGTTCCAACACTGGGATGGCT
CTACCTCGACTCATAATACGAAAGTGTATCACTGAGGCAATGCTACAGATTGCCAGACGT
ATGACAACGCAAATGTTAGACAAAAACCAAAGAAACAAAATCGTGGACAAACAGACGGCG
ATATTGGACGCGGACGACCCGGTCTCCCAACTGCACAAGTGCGCCTTCTACTTGAAAGAT
ACGGAACGAATGTATCTCTGTCTCTCTCAGGAGCGGATTATACAGTTTCAGGCCACCCCA
TGCCCCAAGGAAGCCAACAAAGAAATGATCAACGACGGGGCCTCGTGGACCATCATCTCA
ACCGACAAGGCTGAATATACATTCTGCGATGGAATGGGACCGACCGCTGACCCAGTAACC
CCGGTACCCAACGTCCATAGTTTGCAGTTAAACGGCGGAGGCGACGTTGCAATGCTGGAA
GTGAACGGGGAATGTTTTACGTCCAACCTCAAAGTATGGTTCGGCGAGATAGAAGCCGAC
ACGATGTTCAGATGCGCCGAGGGACTCCTGTGTGTTGTCCCCGACATATCGGCGTTCAGG
GAGGGATGGAAGTGGGTCAAAGAGTCGGTCCAGGTCCCGATCAACCTTGTAAGGAACGAC
GGGGTGATTTACCCCACCAACCTTACCTTTACTTTCACCCCTGAACCCGGCCCCAGGCAG
CACTGCCCCGCTGCGCTTAGTATACTC

InterProScan

SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[1-180] 4.72E-56
SMART
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[15-180] 4.9E-76
Pfam
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[16-180] 1.2E-46
SUPERFAMILY
BTD_sf (IPR036358) - T[178-272] 2.09E-57 - T[299-361] 2.09E-57
SMART
Beta-trefoil_DNA-bd_dom (IPR015350) - T[181-356] 2.5E-78
Pfam
Beta-trefoil_DNA-bd_dom (IPR015350) - T[181-356] 1.3E-66
SUPERFAMILY
Ig_E-set (IPR014756) - T[362-474] 2.8E-35
CDD
RBP-Jkappa_IPT (IPR038007) - T[378-474] 5.06533E-62
Gene3D
Ig-like_fold (IPR013783) - T[383-476] 1.0E-38

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SUH_HUMAN 70.961 % 712 0
RBPJL_HUMAN 46.555 % 448 4.94E-154