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- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.3883332-3905930.18482.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
R19 [3,891,542 / 3,905,930]
Amino acid sequence
Length: 485
>Cisavi.CG.ENS81.R19.3883332-3905930.18482.p
RSLREKWPPKRLTREAMRRYLKEPNDQTLTVLHAKVAQKSYGNEKRFFCPPPCMYLLGNG
WKRKQQTLEEEEGSVEAGQVHAFIGIGSSEQEMQQLHLDGKNFCTAKTLYISDTDKRKHF
MLNVKMFFGKGADVGQFCSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVS
TRYLHVEKGNFHASSIQWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMAL
PRLIIRKVDKQTAILDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEANK
EMINDGASWTIISTDKAEYTFCDGMGPTADPVTPVPNVHSLQLNGGGDVAMLEVNGECFT
SNLKVWFGEIEADTMFRCAEGLLCVVPDISAFREGWKWVKESVQVPINLVRNDGVIYPTN
LTFTFTPEPGPRQHCPAALSILHGTKRPPTSMPPTPVSGSEDDGGRGNESDRGEPTTPLK
RPALD
Nucleotide sequence
Length: 2,002
>Cisavi.CG.ENS81.R19.3883332-3905930.18482.t
AGGTCCTTGCGGGAAAAATGGCCGCCGAAAAGATTGACACGGGAAGCGATGCGACGATAC
TTGAAAGAACCGAACGACCAAACGCTCACAGTGCTTCACGCAAAAGTGGCGCAGAAGTCA
TACGGAAACGAAAAACGGTTCTTCTGTCCTCCCCCATGCATGTATCTCCTGGGCAATGGC
TGGAAGAGAAAGCAGCAAACCTTGGAGGAGGAAGAGGGCTCCGTGGAGGCGGGGCAAGTC
CATGCTTTCATCGGGATCGGGAGCAGCGAGCAAGAGATGCAGCAACTTCATTTGGATGGG
AAGAACTTCTGCACCGCCAAGACGTTGTACATATCCGACACTGACAAGCGAAAACACTTT
ATGCTCAACGTGAAGATGTTCTTCGGCAAAGGTGCTGATGTGGGTCAGTTCTGTAGCAAG
CGGATCAAAGTGATCAGCAAACCTTCAAAGAAGAAACAGTCGCTGAAGAACGCCGACTTG
TGCATCGCATCTGGCACGAAAGTGGCTTTGTTCAACAGACTTCGCTCCCAGACAGTGAGC
ACGAGGTATTTGCACGTGGAAAAGGGAAACTTCCACGCGAGCTCTATACAGTGGGGCTGC
TTCGCCATTCATTTGCTCGACGACGACGAATCGGAATCGGAGGAATTCTCAGTGATGGAC
GGATACATCCACTATGGACAAACCGTCAAGTTGGTGTGTTCCAACACTGGGATGGCTCTA
CCTCGACTCATAATACGAAAGGTGGACAAACAGACGGCGATATTGGACGCGGACGACCCG
GTCTCCCAACTGCACAAGTGCGCCTTCTACTTGAAAGATACGGAACGAATGTATCTCTGT
CTCTCTCAGGAGCGGATTATACAGTTTCAGGCCACCCCATGCCCCAAGGAAGCCAACAAA
GAAATGATCAACGACGGGGCCTCGTGGACCATCATCTCAACCGACAAGGCTGAATATACA
TTCTGCGATGGAATGGGACCGACCGCTGACCCAGTAACCCCGGTACCCAACGTCCATAGT
TTGCAGTTAAACGGCGGAGGCGACGTTGCAATGCTGGAAGTGAACGGGGAATGTTTTACG
TCCAACCTCAAAGTATGGTTCGGCGAGATAGAAGCCGACACGATGTTCAGATGCGCCGAG
GGACTCCTGTGTGTTGTCCCCGACATATCGGCGTTCAGGGAGGGATGGAAGTGGGTCAAA
GAGTCGGTCCAGGTCCCGATCAACCTTGTAAGGAACGACGGGGTGATTTACCCCACCAAC
CTTACCTTTACTTTCACCCCTGAACCCGGCCCCAGGCAGCACTGCCCCGCTGCGCTTAGT
ATACTCCATGGGACCAAGCGGCCCCCCACTTCCATGCCCCCAACCCCCGTTTCCGGCTCC
GAGGACGACGGGGGCCGCGGGAACGAGTCGGACAGGGGCGAACCCACCACGCCCCTTAAA
CGCCCCGCGCTGGACGTGCACGGACGGCCCATGGCGCCCGACGCGTCCGCGACTATGAAC
GGCGTCAATATGCTCAGGACGGCATCGTGACGTCAATTTACAGCCTATGACGTCATAAAA
CACGCCAAACAGTTGGCGGGAAGGAATGCAGTCCACGGAAGAGAGAGCTTGTTAGTACCA
CTGGCGAAATTAACACGCGATTACGTCACGTGATGACGTCAGAGAACCGGATGTTACCTC
ATAACCACAACGCTGCGTGGGCGATACGGTCCCCTGATTTATCTCAAGCCTCCAGCTTAA
ACCAATGTCGCTCAAACTTATCTTCAATTCAACCCCCGTCTGCCCACCAACCCACACCAG
TAGATATAGAACCGACTCCTACCTCAGTTTAAAGGAAAGAACCACGATTTTGAATATTGG
GGTGGTTCAAATCACGACCATCGCTCCGTTTAAAGAGTTCAAAATTACGCGTCCATTTTT
TGTTTGTTTTTCTTCGTGTACCATCCTTTTGTTTTTAATTTGTGTCAATTTTCATGGCGC
TTATTTATCTACTAGCTTCAGC
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[11-159] 6.71E-60 |
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[12-155] 5.7E-166 - T[314-334] 5.7E-166 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[28-159] 3.0E-82 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[29-159] 5.2E-49 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[157-314] 2.35E-64 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[160-309] 1.6E-72 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[160-309] 1.3E-88 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[315-427] 2.8E-35 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[331-427] 4.61483E-62 |
| Gene3D |
Ig-like_fold (IPR013783) - T[336-429] 9.9E-39 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 77.586 % | 755 | 0 |
| RBPJL_HUMAN | 51.802 % | 473 | 5.15E-164 |