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  1. Transcript 'Mooccu.CG.ELv1_2.S50...'
  2. Transcript 'Phmamm.CG.MTP2014.S4...'
  3. Transcript 'Cisavi.CG.ENS81.R19....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.3883332-3905930.18481.t

Possible name(s)

RBPJ; RBPJL

Location

R19 [3,883,331 / 3,905,458]

Sequences

Amino acid sequence

Length: 555

>Cisavi.CG.ENS81.R19.3883332-3905930.18481.p
MYPTHLHHIVQPHAQSSHSRREDIATSSSRDVNGAISSSESAIETFRSLREKWPPKRLTR
EAMRRYLKEPNDQTLTVLHAKVAQKSYGNEKRFFCPPPCMYLLGNGWKRKQQTLEEEEGS
VEAGQVHAFIGIGSSEQEMQQLHLDGKNFCTAKTLYISDTDKRKHFMLNVKMFFGKGADV
GQFCSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEKGNFHAS
SIQWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMALPRLIIRKVDKQTAI
LDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEANKEMINDGASWTIIST
DKAEYTFCDGMGPTADPVTPVPNVHSLQLNGGGDVAMLEVNGECFTSNLKVWFGEIEADT
MFRCAEGLLCVVPDISAFREGWKWVKESVQVPINLVRNDGVIYPTNLTFTFTPEPGPRQH
CPAALSILHGTKRPPTSMPPTPVSGSEDDGGRGNESDRGEPTTPLKRPALDVHGRPMAPD
ASATMNGVNMLRTAS

Nucleotide sequence

Length: 1,819

>Cisavi.CG.ENS81.R19.3883332-3905930.18481.t
ACAATAGGCTGTTTTAAGTGTTGCTATATGAAATTACTGCTCTGATAGAACTTCAAAACT
TGGCAAACTGAAAAGAATATTACCAGTATTACATGCTGAATTGCTGACAGTTATAAAGAG
CAACTAAAACGGATATTTTCAAGTTAATGAGATGTATCCAACCCATCTGCACCATATAGT
ACAACCCCATGCACAAAGCAGTCATTCCAGAAGGGAGGATATTGCTACATCTTCAAGTAG
AGATGTAAATGGAGCGATTAGTTCATCAGAATCGGCTATTGAAACATTCCGGTCCTTGCG
GGAAAAATGGCCGCCGAAAAGATTGACACGGGAAGCGATGCGACGATACTTGAAAGAACC
GAACGACCAAACGCTCACAGTGCTTCACGCAAAAGTGGCGCAGAAGTCATACGGAAACGA
AAAACGGTTCTTCTGTCCTCCCCCATGCATGTATCTCCTGGGCAATGGCTGGAAGAGAAA
GCAGCAAACCTTGGAGGAGGAAGAGGGCTCCGTGGAGGCGGGGCAAGTCCATGCTTTCAT
CGGGATCGGGAGCAGCGAGCAAGAGATGCAGCAACTTCATTTGGATGGGAAGAACTTCTG
CACCGCCAAGACGTTGTACATATCCGACACTGACAAGCGAAAACACTTTATGCTCAACGT
GAAGATGTTCTTCGGCAAAGGTGCTGATGTGGGTCAGTTCTGTAGCAAGCGGATCAAAGT
GATCAGCAAACCTTCAAAGAAGAAACAGTCGCTGAAGAACGCCGACTTGTGCATCGCATC
TGGCACGAAAGTGGCTTTGTTCAACAGACTTCGCTCCCAGACAGTGAGCACGAGGTATTT
GCACGTGGAAAAGGGAAACTTCCACGCGAGCTCTATACAGTGGGGCTGCTTCGCCATTCA
TTTGCTCGACGACGACGAATCGGAATCGGAGGAATTCTCAGTGATGGACGGATACATCCA
CTATGGACAAACCGTCAAGTTGGTGTGTTCCAACACTGGGATGGCTCTACCTCGACTCAT
AATACGAAAGGTGGACAAACAGACGGCGATATTGGACGCGGACGACCCGGTCTCCCAACT
GCACAAGTGCGCCTTCTACTTGAAAGATACGGAACGAATGTATCTCTGTCTCTCTCAGGA
GCGGATTATACAGTTTCAGGCCACCCCATGCCCCAAGGAAGCCAACAAAGAAATGATCAA
CGACGGGGCCTCGTGGACCATCATCTCAACCGACAAGGCTGAATATACATTCTGCGATGG
AATGGGACCGACCGCTGACCCAGTAACCCCGGTACCCAACGTCCATAGTTTGCAGTTAAA
CGGCGGAGGCGACGTTGCAATGCTGGAAGTGAACGGGGAATGTTTTACGTCCAACCTCAA
AGTATGGTTCGGCGAGATAGAAGCCGACACGATGTTCAGATGCGCCGAGGGACTCCTGTG
TGTTGTCCCCGACATATCGGCGTTCAGGGAGGGATGGAAGTGGGTCAAAGAGTCGGTCCA
GGTCCCGATCAACCTTGTAAGGAACGACGGGGTGATTTACCCCACCAACCTTACCTTTAC
TTTCACCCCTGAACCCGGCCCCAGGCAGCACTGCCCCGCTGCGCTTAGTATACTCCATGG
GACCAAGCGGCCCCCCACTTCCATGCCCCCAACCCCCGTTTCCGGCTCCGAGGACGACGG
GGGCCGCGGGAACGAGTCGGACAGGGGCGAACCCACCACGCCCCTTAAACGCCCCGCGCT
GGACGTGCACGGACGGCCCATGGCGCCCGACGCGTCCGCGACTATGAACGGCGTCAATAT
GCTCAGGACGGCATCGTGA

InterProScan

SUPERFAMILY
p53-like_TF_DNA-bd (IPR008967) - T[57-205] 8.7E-60
Gene3D
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[58-201] 8.4E-166 - T[360-380] 8.4E-166
SMART
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[74-205] 3.0E-82
Pfam
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[75-205] 6.6E-49
SUPERFAMILY
BTD_sf (IPR036358) - T[203-360] 3.14E-64
SMART
Beta-trefoil_DNA-bd_dom (IPR015350) - T[206-355] 1.3E-88
Pfam
Beta-trefoil_DNA-bd_dom (IPR015350) - T[206-355] 2.1E-72
SUPERFAMILY
Ig_E-set (IPR014756) - T[361-473] 4.0E-35
CDD
RBP-Jkappa_IPT (IPR038007) - T[377-473] 2.1209E-61
Gene3D
Ig-like_fold (IPR013783) - T[382-475] 1.2E-38

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SUH_HUMAN 77.586 % 758 0
RBPJL_HUMAN 51.802 % 475 1.15E-163