- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.3883332-3905930.18481.t
Possible name(s)
RBPJ; RBPJL
Gene model
Location
R19 [3,883,331 / 3,905,458]
Amino acid sequence
Length: 555
>Cisavi.CG.ENS81.R19.3883332-3905930.18481.p
MYPTHLHHIVQPHAQSSHSRREDIATSSSRDVNGAISSSESAIETFRSLREKWPPKRLTR
EAMRRYLKEPNDQTLTVLHAKVAQKSYGNEKRFFCPPPCMYLLGNGWKRKQQTLEEEEGS
VEAGQVHAFIGIGSSEQEMQQLHLDGKNFCTAKTLYISDTDKRKHFMLNVKMFFGKGADV
GQFCSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEKGNFHAS
SIQWGCFAIHLLDDDESESEEFSVMDGYIHYGQTVKLVCSNTGMALPRLIIRKVDKQTAI
LDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEANKEMINDGASWTIIST
DKAEYTFCDGMGPTADPVTPVPNVHSLQLNGGGDVAMLEVNGECFTSNLKVWFGEIEADT
MFRCAEGLLCVVPDISAFREGWKWVKESVQVPINLVRNDGVIYPTNLTFTFTPEPGPRQH
CPAALSILHGTKRPPTSMPPTPVSGSEDDGGRGNESDRGEPTTPLKRPALDVHGRPMAPD
ASATMNGVNMLRTAS
Nucleotide sequence
Length: 1,819
>Cisavi.CG.ENS81.R19.3883332-3905930.18481.t
ACAATAGGCTGTTTTAAGTGTTGCTATATGAAATTACTGCTCTGATAGAACTTCAAAACT
TGGCAAACTGAAAAGAATATTACCAGTATTACATGCTGAATTGCTGACAGTTATAAAGAG
CAACTAAAACGGATATTTTCAAGTTAATGAGATGTATCCAACCCATCTGCACCATATAGT
ACAACCCCATGCACAAAGCAGTCATTCCAGAAGGGAGGATATTGCTACATCTTCAAGTAG
AGATGTAAATGGAGCGATTAGTTCATCAGAATCGGCTATTGAAACATTCCGGTCCTTGCG
GGAAAAATGGCCGCCGAAAAGATTGACACGGGAAGCGATGCGACGATACTTGAAAGAACC
GAACGACCAAACGCTCACAGTGCTTCACGCAAAAGTGGCGCAGAAGTCATACGGAAACGA
AAAACGGTTCTTCTGTCCTCCCCCATGCATGTATCTCCTGGGCAATGGCTGGAAGAGAAA
GCAGCAAACCTTGGAGGAGGAAGAGGGCTCCGTGGAGGCGGGGCAAGTCCATGCTTTCAT
CGGGATCGGGAGCAGCGAGCAAGAGATGCAGCAACTTCATTTGGATGGGAAGAACTTCTG
CACCGCCAAGACGTTGTACATATCCGACACTGACAAGCGAAAACACTTTATGCTCAACGT
GAAGATGTTCTTCGGCAAAGGTGCTGATGTGGGTCAGTTCTGTAGCAAGCGGATCAAAGT
GATCAGCAAACCTTCAAAGAAGAAACAGTCGCTGAAGAACGCCGACTTGTGCATCGCATC
TGGCACGAAAGTGGCTTTGTTCAACAGACTTCGCTCCCAGACAGTGAGCACGAGGTATTT
GCACGTGGAAAAGGGAAACTTCCACGCGAGCTCTATACAGTGGGGCTGCTTCGCCATTCA
TTTGCTCGACGACGACGAATCGGAATCGGAGGAATTCTCAGTGATGGACGGATACATCCA
CTATGGACAAACCGTCAAGTTGGTGTGTTCCAACACTGGGATGGCTCTACCTCGACTCAT
AATACGAAAGGTGGACAAACAGACGGCGATATTGGACGCGGACGACCCGGTCTCCCAACT
GCACAAGTGCGCCTTCTACTTGAAAGATACGGAACGAATGTATCTCTGTCTCTCTCAGGA
GCGGATTATACAGTTTCAGGCCACCCCATGCCCCAAGGAAGCCAACAAAGAAATGATCAA
CGACGGGGCCTCGTGGACCATCATCTCAACCGACAAGGCTGAATATACATTCTGCGATGG
AATGGGACCGACCGCTGACCCAGTAACCCCGGTACCCAACGTCCATAGTTTGCAGTTAAA
CGGCGGAGGCGACGTTGCAATGCTGGAAGTGAACGGGGAATGTTTTACGTCCAACCTCAA
AGTATGGTTCGGCGAGATAGAAGCCGACACGATGTTCAGATGCGCCGAGGGACTCCTGTG
TGTTGTCCCCGACATATCGGCGTTCAGGGAGGGATGGAAGTGGGTCAAAGAGTCGGTCCA
GGTCCCGATCAACCTTGTAAGGAACGACGGGGTGATTTACCCCACCAACCTTACCTTTAC
TTTCACCCCTGAACCCGGCCCCAGGCAGCACTGCCCCGCTGCGCTTAGTATACTCCATGG
GACCAAGCGGCCCCCCACTTCCATGCCCCCAACCCCCGTTTCCGGCTCCGAGGACGACGG
GGGCCGCGGGAACGAGTCGGACAGGGGCGAACCCACCACGCCCCTTAAACGCCCCGCGCT
GGACGTGCACGGACGGCCCATGGCGCCCGACGCGTCCGCGACTATGAACGGCGTCAATAT
GCTCAGGACGGCATCGTGA
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[57-205] 8.7E-60 |
| Gene3D |
RBP-J/Cbf11/Cbf12_DNA-bd_sf (IPR037095) - T[58-201] 8.4E-166 - T[360-380] 8.4E-166 |
| SMART |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[74-205] 3.0E-82 |
| Pfam |
RBP-J/Cbf11/Cbf12_DNA-bd (IPR015351) - T[75-205] 6.6E-49 |
| SUPERFAMILY |
BTD_sf (IPR036358) - T[203-360] 3.14E-64 |
| SMART |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[206-355] 1.3E-88 |
| Pfam |
Beta-trefoil_DNA-bd_dom (IPR015350) - T[206-355] 2.1E-72 |
| SUPERFAMILY |
Ig_E-set (IPR014756) - T[361-473] 4.0E-35 |
| CDD |
RBP-Jkappa_IPT (IPR038007) - T[377-473] 2.1209E-61 |
| Gene3D |
Ig-like_fold (IPR013783) - T[382-475] 1.2E-38 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SUH_HUMAN | 77.586 % | 758 | 0 |
| RBPJL_HUMAN | 51.802 % | 475 | 1.15E-163 |