- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.3028210-3043876.17439.t
Possible name(s)
CDC23; CDC27; TTC6
Gene model
Location
R19 [3,028,209 / 3,043,876]
Amino acid sequence
Length: 868
>Cisavi.CG.ENS81.R19.3028210-3043876.17439.p
MTVLQDPIKNAIWHCLNHYAYKDAMFLAERLYSEVATDEAMFLLATSYYRYGKPKVAQRL
LEKHGVRQPECKLLYAKACWDLEHYTQAENALTGGSIKFKSIMNIVSSVQAEFGDSSCFA
LSLLGCIYRHTEREEWAEYCFTTSLKLNPFLWSSFEQLCEAGNKPNVDELFPPVQSEFKS
PYITSFNASLQQTPQIVQQRRKKGNTVKILAPSQVGSNTDRADSIPALSTTPIQMQAADQ
GHACQTSPSLEDSRSVERIASCKDGDETNSDFLRSTPSETKWDSSLDSYTGLTSRKKNTR
TQQRIARSLMGGPAALSPLTPSFGVMPLVETPSPAWDRSVAMITPTDTTALPMDINPPVK
KMITRQSRKNNELTNATGKLLFSSENSRRSQEVQGSTTEVPSSVTSSRRSTRNYPNSGSS
VKENAKKSTRVKQAQPKDVLKRNTRLRHTKPLTSDGTVRDLSEEINKVDSSSENPKPTTN
PTSMSHVLSAQKSAIDGLMSLLRDMGKALVALCHYDCRRAISCIESLPANQRATCWSLSL
LSKAYFEMTEYKKAARTFSELRSQFPHQVSGLALYSTTLWHLQDNIALSTLAHDVRDLDP
FSPETWCCIGNCFSLRRDNENAIKFFARAVQLAPRYAYAHTLLGHEYAYSDDNERAMASY
RRAIHCDRRHYNAWYGIGSIYYKQENFSLAEIHFKKALSINQRSSVLLCHLGIVQHAQKR
SSIALETLANALSLEPRNPLCKFHRAMILFATEQHQDALKELLELKQIVPKESLIYFLIG
KVYKVLGENHLAMMNFSWALDLDPKGINNHIKEAIDKQQSVDDCFDSSHLGNGRNTDESS
STVDIMNSIIDEVESTEQEMTADSDESL
Nucleotide sequence
Length: 3,093
>Cisavi.CG.ENS81.R19.3028210-3043876.17439.t
TTAAAGGCCGTGGAAAATAAAACGACTACCTTATCCTGTGCTACCACAATTTACTTGCGT
ACATGATAAGTATTCGCTAATACTTGCAAGTGGGCGATAGAGAGAGTCAGAAGGAAACAA
AGTGTGAAGTTGGTATAAATTAATGCGCTAGTCAACCTAGCTTTAGGTCTGGAATTTCGA
CTTCATATAAAGTTAGGTTACCACAGTTGCATTGTGATGACTGTTCTTCAAGACCCAATT
AAGAATGCTATTTGGCATTGTCTCAACCATTATGCATACAAAGATGCCATGTTTTTGGCA
GAGCGACTTTATTCTGAAGTTGCAACAGACGAGGCGATGTTTCTACTGGCCACCTCTTAC
TACCGATATGGAAAGCCCAAAGTCGCCCAAAGATTATTAGAAAAACATGGAGTTCGGCAA
CCAGAATGCAAATTGCTTTATGCTAAAGCATGCTGGGACTTAGAACATTACACGCAAGCT
GAGAATGCTCTTACCGGTGGCTCGATAAAGTTCAAATCTATCATGAACATTGTGTCGAGT
GTCCAAGCTGAGTTTGGTGATTCTTCCTGCTTTGCTTTATCGTTACTCGGATGTATATAC
CGACATACCGAGCGTGAGGAATGGGCAGAGTATTGCTTCACCACCAGTCTCAAGCTCAAC
CCATTCCTGTGGTCTTCATTTGAGCAACTGTGTGAAGCAGGAAACAAGCCAAATGTAGAT
GAACTCTTTCCTCCAGTTCAATCTGAGTTCAAATCACCTTACATAACTTCATTTAACGCT
TCACTTCAGCAAACTCCCCAAATAGTCCAGCAGAGAAGGAAAAAGGGAAACACTGTGAAA
ATACTAGCTCCAAGCCAGGTTGGATCAAACACAGATCGAGCGGATTCCATTCCAGCGTTA
TCAACAACCCCTATACAAATGCAAGCCGCTGATCAAGGCCATGCTTGCCAAACCTCACCA
TCTTTGGAAGATTCGCGCAGTGTGGAGCGGATAGCTTCATGTAAAGATGGAGATGAAACA
AACTCTGATTTTCTTCGATCCACACCATCTGAAACAAAGTGGGACAGCTCGTTGGATTCC
TACACCGGGTTAACTTCCCGTAAAAAGAACACTCGCACACAGCAGAGAATTGCACGCAGT
TTAATGGGGGGTCCAGCTGCACTGAGCCCTTTAACCCCAAGTTTCGGTGTAATGCCGCTA
GTGGAGACACCAAGTCCTGCGTGGGATCGATCGGTTGCAATGATCACACCAACCGACACC
ACAGCTCTGCCCATGGACATCAATCCTCCTGTTAAAAAGATGATCACAAGGCAATCTCGA
AAGAACAATGAGTTGACAAACGCCACCGGGAAACTTCTTTTTTCCTCGGAAAACAGTCGC
AGGAGTCAGGAGGTGCAAGGATCAACGACAGAGGTCCCGTCTTCTGTCACCTCGTCAAGA
AGGAGCACAAGGAATTACCCGAACTCTGGAAGCTCTGTCAAGGAAAATGCCAAAAAGTCC
ACCAGGGTAAAACAAGCACAACCCAAAGATGTGTTGAAACGTAATACTCGCCTAAGACAT
ACAAAACCTTTAACTTCTGATGGAACTGTCCGGGATTTATCGGAAGAAATCAACAAAGTC
GATTCCAGTTCCGAAAACCCGAAACCAACCACCAACCCCACCAGCATGTCCCACGTGCTG
TCTGCACAGAAGTCTGCTATCGATGGACTGATGTCACTATTAAGAGACATGGGCAAAGCA
TTGGTTGCTTTATGCCACTATGACTGCAGGAGGGCCATATCTTGTATTGAATCGTTGCCA
GCAAATCAAAGAGCTACTTGCTGGTCACTCTCCCTTCTTTCGAAAGCTTATTTTGAAATG
ACCGAATATAAAAAGGCAGCACGGACGTTCAGCGAGCTGAGGTCGCAATTCCCCCACCAG
GTGTCAGGGTTGGCTCTCTACAGCACCACCTTGTGGCACTTGCAGGATAACATCGCGCTC
AGCACCCTTGCACACGACGTCCGAGACCTGGACCCATTCTCACCTGAGACCTGGTGTTGC
ATCGGCAATTGCTTCTCCCTGCGACGGGACAACGAAAACGCGATCAAGTTCTTTGCACGA
GCGGTCCAACTGGCCCCACGATACGCCTACGCGCACACGCTGCTCGGCCACGAGTATGCG
TACAGTGATGACAACGAGCGCGCGATGGCAAGCTACCGACGAGCTATTCACTGTGATAGA
AGACATTATAATGCATGGTATGGAATTGGCTCCATTTATTACAAGCAAGAAAACTTTTCC
CTGGCTGAAATCCACTTCAAGAAAGCACTTTCAATTAATCAAAGAAGTTCAGTTCTTTTA
TGTCATTTAGGGATTGTGCAGCACGCTCAAAAACGTTCGTCAATCGCGCTCGAAACCCTG
GCGAACGCTCTCTCGTTGGAGCCACGCAATCCACTCTGTAAGTTCCATCGCGCGATGATC
CTGTTCGCCACCGAACAACACCAGGACGCACTCAAAGAACTTCTCGAACTCAAGCAAATT
GTGCCCAAGGAAAGTCTGATCTATTTCCTTATTGGAAAGGTTTACAAAGTCCTCGGAGAG
AACCATCTTGCCATGATGAACTTCTCATGGGCGCTCGATCTCGATCCGAAAGGAATCAAC
AATCACATCAAAGAAGCGATCGACAAACAGCAATCTGTCGACGATTGCTTCGATAGCAGC
CATCTTGGAAACGGCAGAAACACAGATGAATCGAGCAGCACAGTTGATATAATGAACTCG
ATAATCGATGAAGTCGAATCCACAGAACAAGAAATGACGGCAGATAGCGATGAGAGTTTA
TGAGTTCTTTTTTGAATCTTATTTATTTCTGGTTCTACACGAAGCGATGTACAACCCAAC
GTTTCCCATCTTCAGCGTATAACTTGCTGTTCTTACCTCTCTCCCTATACTTTGAAATCC
GTCGGATTCGAGAATGTGCTTAAAAATAAACTGTAGGTGACCTTCTACAAACAAATGTGC
TTTTTTATATTAATATGATCGTATCAGTTTACAAAAAAAATGAACTGTAGGGGACCTTTC
TACACTCAACAGTGTTTTTTTTCATATTGAAAC
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-172] 1.3E-42 - T[491-566] 7.4E-19 - T[568-700] 3.1E-46 - T[701-804] 1.3E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[39-159] 3.8E-17 - T[491-560] 3.8E-17 - T[600-806] 2.28E-35 |
| SMART |
TPR_repeat (IPR019734) - T[118-151] 2.5 - T[535-568] 100.0 - T[603-636] 4.1E-4 - T[637-670] 0.11 - T[671-704] 9.7E-6 - T[705-738] 3.4 - T[739-772] 170.0 - T[773-806] 1.9 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[118-151] 6.107 - T[535-568] 6.549 - T[603-636] 10.06 - T[637-670] 8.703 - T[671-704] 10.62 - T[705-738] 7.995 - T[773-806] 9.794 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[535-806] 38.634 |
| Pfam |
TPR_repeat (IPR019734) - T[541-566] 0.11 |
| Pfam |
TPR_1 (IPR001440) - T[672-702] 2.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDC23_HUMAN | 35.028 % | 115 | 1.58E-26 |
| CDC27_HUMAN | 44.621 % | 691 | 0 |
