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  1. Transcript 'Cisavi.CG.ENS81.R19....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.2297086-2316688.15597.t

Possible name(s)

TRAM1; TRAM1L1; TRAM2

Gene model

Cisavi.CG.ENS81.R19.2297086-2316688

Location

R19 [2,297,085 / 2,316,688]

Sequences

Amino acid sequence

Length: 377

>Cisavi.CG.ENS81.R19.2297086-2316688.15597.p
MGMPRKKPKSPPIMSHEFVIQNHADILACIAILIVLGLVAEITAKVSRVFVFLQHGFIKN
EEGELEPAVGKDAFPIEFTRGYLDIFTVLFQAMMLIVVHAVIQEYIVDKVSKKLHLSKTK
NSRFSESGQLLVWCIVAVGWSAHLIIKNGFFSNISALWEDYPHTIIHWETKLYLLVQMAY
WVHMYPELYFQKARKEEIPTRVRYYTLHLVFLAGAYALNFWRVSLIMGMLHFTAEAVFHA
SRLLYFAEKNELAEMGFTIWRFVFPIVRLLILAIGFLTFRLGLGRAEIQEVDFATGNFNS
PFVRIVCLSSLFVLQVWLMWPYTQLIVRRRNEQEELKKKAAVLSTAKPKPVGKKQKKDGS
FESTNGVGGKSGKLKKN

Nucleotide sequence

Length: 1,772

>Cisavi.CG.ENS81.R19.2297086-2316688.15597.t
GTTTAAGGTTCTTCTGATATTGTAGACATTAGTTAAACAAGTTAATAGAATCATGGGAAT
GCCACGTAAGAAGCCAAAGAGTCCACCTATCATGAGCCATGAATTTGTGATACAAAATCA
TGCGGATATTTTGGCGTGCATTGCCATTTTGATTGTTCTTGGTCTGGTTGCCGAGATAAC
GGCTAAAGTAAGCAGAGTATTTGTCTTTCTTCAACATGGATTTATCAAAAATGAAGAGGG
AGAACTGGAACCAGCTGTCGGGAAAGATGCATTCCCCATCGAATTCACACGAGGATACCT
TGATATTTTTACCGTTTTGTTCCAAGCCATGATGTTGATTGTTGTGCATGCCGTCATCCA
AGAATATATTGTTGATAAAGTGTCAAAGAAGCTTCATCTGTCAAAGACGAAGAACAGTCG
GTTCAGTGAATCTGGTCAGCTCCTTGTCTGGTGCATTGTGGCTGTTGGGTGGTCTGCCCA
CCTCATTATCAAGAATGGATTTTTTAGCAACATCTCAGCTTTATGGGAAGATTACCCACA
TACGATCATTCACTGGGAAACCAAGCTTTACCTGCTTGTTCAGATGGCCTATTGGGTGCA
TATGTATCCAGAACTTTATTTCCAAAAAGCAAGAAAAGAGGAGATTCCTACAAGAGTCCG
CTACTACACCCTTCACCTGGTGTTTCTGGCTGGAGCTTATGCTTTAAATTTCTGGAGGGT
AAGTCTGATCATGGGAATGCTACATTTCACCGCGGAAGCAGTTTTCCATGCGTCGAGGTT
ACTTTATTTTGCCGAGAAGAATGAATTGGCAGAAATGGGATTCACGATCTGGCGATTTGT
TTTCCCAATTGTGAGACTCCTCATCCTCGCAATTGGGTTCCTGACTTTCAGGCTTGGTCT
CGGCCGAGCTGAAATACAGGAGGTCGATTTTGCCACCGGGAATTTTAACTCGCCCTTTGT
CAGGATTGTTTGTTTGTCGAGTCTCTTTGTGCTGCAAGTGTGGTTGATGTGGCCGTACAC
CCAGCTCATTGTAAGGAGAAGAAATGAACAGGAGGAACTGAAGAAAAAGGCCGCCGTTCT
TTCTACGGCAAAGCCCAAGCCTGTCGGCAAGAAACAGAAAAAAGACGGCTCGTTTGAATC
CACCAATGGTGTTGGTGGGAAGTCAGGAAAACTGAAGAAGAACTGATAATGAAACAACCC
GTATCAATTTCTTTTGTCGAAAAAACGTTTTTCTATTTTGCAAATCTTTTTTCTTTGTTT
TGAGCTCGTTTGGGGGGCGGGAGCGATTTAATTATTGGTGGGTGATTGTGCCGGTAAGAA
GACGGTGATATTTCAAAATAATGAGTTCACCCACAATTATCTTTAACTAGCCGTTCGCCA
GTCAAGCTTAGACGGCCATTTTTTACACTGGGTCGTGTTTTTGGATCACCATCACTATAT
TATCATCTGCTGTCCACCATACCACATTGTTGCTATTCATAAAGCGGCAATAATTTCTGT
TTTACCGTTTCTATCAGCCACAGTATCGTATGCGAGTTCTGACAAATGCCTGTGCAGCCA
TATGCTCATTAAGGACAATTTCCTATTCTTATCGGGACTTCCTTAATATGGACATTTTAC
TTTTCTGGTCGAGGGATTGTTTAAAATTCGTCTTGGAAATAAGGCACATTGAAAACAACC
TGCGTATAAGCGCCAGGTGGTACTAACTAAACCAAAGTAGCAAGCCTTTTTTGAACTTAA
GTTGCTCAACGACTTTGTAAACAAATATGTGA

InterProScan

PIRSF
Translocation_assoc_membrane (IPR016447) - T[1-377] 2.1E-147
Pfam
TRAM1 (IPR013599) - T[49-120] 1.7E-11
SMART
TLC-dom (IPR006634) - T[122-333] 8.8E-18
Pfam
TLC-dom (IPR006634) - T[123-320] 9.1E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRAM1_HUMAN 41.351 % 285 5.72E-94
TRAM2_HUMAN 39.628 % 277 7.38E-91
TR1L1_HUMAN 35 % 215 6.84E-67