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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R19....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R19.1685995-1700440.14785.t

Possible name(s)

KCNQ1; KCNQ3; KCNQ5

Gene model

Cisavi.CG.ENS81.R19.1685995-1700440

Location

R19 [1,689,466 / 1,700,440]

Sequences

Amino acid sequence

Length: 269

>Cisavi.CG.ENS81.R19.1685995-1700440.14785.p
FMMVLVCLIFSVLSTIEGQERPTVKPLLIMEAILVVVFTIEYFVRLWSAGSIGKYQGCYG
RLRFARKPICVIDLMVVSASVIILLVGSNGNIFAASAIRGIRFLQILRMLHVDRQGGTWR
LLGHVVYIHRQELITTLYIGFLALIFSSYFVYLAEKPSIDGTSPNGKFRSYADALWWGVV
TVTTIGYGDHVPITWLGKVIASCFSIFAISFFALPAGILGSGFALKVQQKQRQKQFNRQI
PAAAALIQATWRCYATTVGTSCSGTWRLF

Nucleotide sequence

Length: 1,253

>Cisavi.CG.ENS81.R19.1685995-1700440.14785.t
ATCTCGAGTGAGGCATCTATCCACGATTTATAAACCTGCAAATTCAGAGACGATATATGG
AAAAAATGTGCGAAGACCGCGTCGTTTATTTAATAGCGCCCCGTGTGAAACCAGCGTTCC
CGATATTACAACGAATACACAGCAGAACGACAACTTACCCCCAGAACAGATCCCGTTCAT
TACCGTCACCCCAATATCCCCGACAATCCCACATAACAAACCCGAAGTACAAAAACGTGA
CAGTCTAAATGCCCCTCCTTTCTACAGAACAAGTCGGTAAGTTACATCCACCCTCTCACG
GCATGATAGGCCACGATGCGCGGACCCTCAAAGCGATCCGCGACATGAAGGAGAACCGAG
CGAAACACCGCAAGTGGCAACAACAGGCGTACAACTTCCTCGAACGTCCCACTGGTGTGA
AGTGCTTCATATATCACGTCATGGTGTTTATGATGGTCCTGGTGTGTCTGATATTCAGCG
TTCTTTCAACCATAGAGGGTCAAGAGCGACCAACCGTAAAGCCCCTACTCATAATGGAGG
CAATTCTCGTTGTTGTGTTTACGATTGAATACTTCGTCCGTTTGTGGTCGGCTGGGAGCA
TAGGGAAATACCAGGGCTGTTACGGGCGTCTTCGATTCGCTAGAAAGCCAATTTGCGTTA
TTGATCTGATGGTGGTCAGTGCATCGGTCATCATCTTACTTGTTGGGAGCAATGGAAACA
TCTTTGCCGCTTCCGCTATCCGTGGTATACGCTTTCTCCAGATACTACGAATGCTCCATG
TGGATCGACAGGGCGGTACATGGAGGTTATTAGGTCATGTGGTGTACATCCACCGACAGG
AGTTGATCACCACATTATACATTGGCTTCCTGGCTCTCATCTTCTCTTCGTATTTCGTCT
ATCTGGCGGAAAAGCCATCCATAGACGGGACCTCACCAAATGGAAAGTTCCGGAGTTACG
CTGATGCGCTATGGTGGGGGGTGGTGACAGTCACGACCATTGGATATGGAGACCACGTTC
CGATCACGTGGCTAGGAAAAGTTATCGCGTCATGTTTCTCAATCTTCGCTATTTCCTTCT
TCGCTCTGCCAGCTGGGATTCTCGGGTCGGGCTTCGCATTAAAAGTTCAACAAAAGCAAC
GACAGAAGCAGTTTAATCGCCAGATCCCGGCGGCTGCCGCACTTATACAAGCAACATGGC
GATGCTATGCAACCACTGTTGGAACAAGTTGCTCTGGAACATGGCGATTGTTT

InterProScan

PANTHER
VG_K_chnl (IPR028325) - T[1-269] 1.2E-160
Pfam
Ion_trans_dom (IPR005821) - T[2-227] 1.2E-25
PRINTS
VG_K_chnl (IPR028325) - T[29-52] 1.2E-21 - T[103-129] 1.2E-21 - T[132-155] 1.2E-21 - T[168-190] 1.2E-21 - T[197-223] 1.2E-21
PRINTS
K_chnl_volt-dep_KCNQ (IPR003937) - T[37-56] 3.0E-24 - T[57-76] 3.0E-24 - T[119-138] 3.0E-24

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KCNQ1_HUMAN 73.606 % 387 1.72E-131
KCNQ4_HUMAN 57.678 % 315 2.0E-103
KCNQ2_HUMAN 55.556 % 330 2.25E-107