- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.1685995-1700440.14784.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ5
Gene model
Location
R19 [1,685,994 / 1,697,306]
Amino acid sequence
Length: 481
>Cisavi.CG.ENS81.R19.1685995-1700440.14784.p
TPQEPQPSVTPSHGMIGHDARTLKAIRDMKENRAKHRKWQQQAYNFLERPTGVKFHRHRF
MMVLVCLIFSVLSTIEGQERPTVKPLLIMEAILVVVFTIEYFVRLWSAGSIGKYQGCYGR
LRFARKPICVIDLMVVSASVIILLVGSNGNIFAASAIRGIRFLQILRMLHVDRQGGTWRL
LGHVVYIHRQELITTLYIGFLALIFSSYFVYLAEKPSIDGTSPNGKFRSYADALWWGVVT
VTTIGYGDHVPITWLGKVIASCFSIFAISFFALPAGILGSGFALKVQQKQRQKQFNRQIP
AAAALIQATWRCYATTVGTSCSGTWRLFKVAHHHSDVTNVDDVFVDERQSKTSKNPFISR
ISLDLPMFRSGATRSKSDRNKSVQFETTIDLDENPADGCRDLGFRVDSIFYSRMPESYKN
VVRATRRLIYFLAKKRFQQSRKPYDVRDVVEQYSQGHANVMMRIKEVQRRLDLTLGKPSS
F
Nucleotide sequence
Length: 1,746
>Cisavi.CG.ENS81.R19.1685995-1700440.14784.t
ACACCCCAGGAACCCCAACCGTCAGTCACACCCTCTCACGGCATGATAGGCCACGATGCG
CGGACCCTCAAAGCGATCCGCGACATGAAGGAGAACCGAGCGAAACACCGCAAGTGGCAA
CAACAGGCGTACAACTTCCTCGAACGTCCCACTGGTGTGAAATTTCATCGTCACAGGTTT
ATGATGGTCCTGGTGTGTCTGATATTCAGCGTTCTTTCAACCATAGAGGGTCAAGAGCGA
CCAACCGTAAAGCCCCTACTCATAATGGAGGCAATTCTCGTTGTTGTGTTTACGATTGAA
TACTTCGTCCGTTTGTGGTCGGCTGGGAGCATAGGGAAATACCAGGGCTGTTACGGGCGT
CTTCGATTCGCTAGAAAGCCAATTTGCGTTATTGATCTGATGGTGGTCAGTGCATCGGTC
ATCATCTTACTTGTTGGGAGCAATGGAAACATCTTTGCCGCTTCCGCTATCCGTGGTATA
CGCTTTCTCCAGATACTACGAATGCTCCATGTGGATCGACAGGGCGGTACATGGAGGTTA
TTAGGTCATGTGGTGTACATCCACCGACAGGAGTTGATCACCACATTATACATTGGCTTC
CTGGCTCTCATCTTCTCTTCGTATTTCGTCTATCTGGCGGAAAAGCCATCCATAGACGGG
ACCTCACCAAATGGAAAGTTCCGGAGTTACGCTGATGCGCTATGGTGGGGGGTGGTGACA
GTCACGACCATTGGATATGGAGACCACGTTCCGATCACGTGGCTAGGAAAAGTTATCGCG
TCATGTTTCTCAATCTTCGCTATTTCCTTCTTCGCTCTGCCAGCTGGGATTCTCGGGTCG
GGCTTCGCATTAAAAGTTCAACAAAAGCAACGACAGAAGCAGTTTAATCGCCAGATCCCG
GCGGCTGCCGCACTTATACAAGCAACATGGCGATGCTATGCAACCACTGTTGGAACAAGT
TGCTCTGGAACATGGCGATTGTTTAAAGTGGCGCACCATCATTCTGACGTCACAAATGTC
GATGACGTATTCGTCGACGAGCGCCAATCAAAAACGAGCAAAAATCCGTTCATCTCCCGG
ATAAGTCTGGATCTTCCAATGTTCCGCTCGGGGGCGACAAGGAGCAAATCGGATCGGAAT
AAATCGGTTCAGTTCGAGACGACGATTGATCTTGATGAAAATCCTGCCGATGGGTGCCGA
GATTTAGGTTTCCGTGTTGATTCTATTTTTTATTCCAGAATGCCCGAATCCTACAAGAAT
GTAGTCAGAGCGACGCGTCGATTGATTTACTTTTTGGCGAAAAAGCGTTTTCAGCAATCG
CGGAAGCCCTATGACGTAAGAGACGTGGTCGAGCAGTACTCGCAGGGTCACGCAAACGTG
ATGATGAGAATCAAAGAGGTTCAACGAAGATTGGACTTGACATTGGGGAAGCCATCTTCG
TTCCTTAGCGCGCAAGGGGAGCTCGGGGGCACTTCGCCTGTGCTTGATCGACAGAAATTA
ACCGCCGGGGGGGCGCCTTCTGCGCCTGGAAAGATGGACAGAAGCAACCGATAGAAAATT
GGACGCCATCTTGAAAATATTGGATAAAATGAGCGATAACTGATGAATCTTGATGTAAAA
CCAACGCTTGAGATATGTTTGAAATGTGTGACGTTAGTTGTGATTACGTCATGTTGAAGA
CGGAATTACTAAAGTTTTTGTTCATTTTTTACAAGAAAACCAATCAGGCCAACAAATGCA
CTAGTG
| PANTHER |
VG_K_chnl (IPR028325) - T[8-480] 7.1E-214 |
| Pfam |
Ion_trans_dom (IPR005821) - T[60-285] 2.8E-25 |
| PRINTS |
VG_K_chnl (IPR028325) - T[88-111] 1.3E-20 - T[162-188] 1.3E-20 - T[191-214] 1.3E-20 - T[227-249] 1.3E-20 - T[256-282] 1.3E-20 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[96-115] 1.3E-23 - T[116-135] 1.3E-23 - T[178-197] 1.3E-23 |
| Pfam |
K_chnl_volt-dep_KCNQ_C (IPR013821) - T[379-479] 6.9E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 57.234 % | 491 | 7.97E-169 |
| KCNQ3_HUMAN | 41.273 % | 362 | 2.12E-116 |
| KCNQ5_HUMAN | 44.191 % | 387 | 1.08E-125 |