- Transcript 'KH2012:KH.C11.328.v1...' >
- Molecular Tool 'cicl11b03-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.S1248.1.v1...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R19....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R19.1631247-1634693.14467.t
Possible name(s)
CTGF; CYR61; WISP1
Gene model
Location
R19 [1,631,330 / 1,634,350]
Amino acid sequence
Length: 320
>Cisavi.CG.ENS81.R19.1631247-1634693.14467.p
CPVGVSLIPGECGCCKQCARQLDETCNDQMLCDPHRNLYCAYSDVDQREGRCVAKPGRAC
LSSGHTYVNGESFLIGCKVKCTCMDGVLACENNCPVTITASAPKNCRHPQLVKRPNQCCS
EWICSGASLNNNTTLPRPAPSNQQTRRRLHPNAFRPRIIAMGRLLSNFECGFRAANRRTP
ISITVRAKDKCNVQTTEWSACSKTCGWGVSERVTNDNKACKLRKQSRLCQIRPCSANFAD
NIKRGKKCIRTVKAQRRVQYSFSGCQSKVYTPKYCGECVDGRCCTPKETVTRPVKFTCDG
GFKFKKRMMVIKSCSCHRKC
Nucleotide sequence
Length: 960
>Cisavi.CG.ENS81.R19.1631247-1634693.14467.t
TGCCCAGTCGGGGTGAGTCTTATACCGGGCGAGTGTGGGTGCTGCAAGCAGTGCGCCAGG
CAACTGGATGAAACCTGCAACGACCAAATGCTCTGCGACCCCCACAGGAACTTATACTGC
GCCTATTCGGACGTGGACCAACGTGAAGGGAGATGTGTAGCCAAGCCAGGCCGAGCATGT
CTGTCAAGCGGTCACACTTACGTGAACGGAGAGTCCTTTCTCATTGGCTGCAAAGTGAAG
TGTACCTGTATGGACGGAGTGCTAGCTTGTGAGAACAACTGCCCAGTAACCATCACTGCT
TCTGCTCCCAAGAACTGCCGACATCCACAACTGGTAAAGCGACCTAACCAGTGCTGTTCC
GAGTGGATCTGCAGCGGTGCGTCCTTGAATAACAACACAACACTCCCCCGACCAGCACCG
TCCAATCAACAGACCAGGAGACGGCTTCATCCTAATGCTTTCAGGCCAAGAATTATTGCA
ATGGGTAGGTTATTGAGCAATTTTGAATGTGGATTCCGCGCAGCGAACCGCCGAACGCCT
ATCTCCATCACCGTACGGGCCAAGGACAAGTGTAATGTGCAGACAACTGAATGGTCGGCG
TGCTCCAAGACCTGCGGCTGGGGGGTATCCGAGAGGGTCACCAACGATAACAAAGCCTGC
AAACTCCGCAAGCAATCCAGACTCTGTCAAATCCGACCTTGCAGTGCCAACTTCGCAGAT
AACATTAAGCGTGGAAAGAAATGCATCCGCACCGTGAAAGCTCAGCGACGAGTCCAATAT
TCCTTCTCCGGGTGCCAGAGCAAGGTATACACCCCCAAATACTGCGGCGAGTGCGTGGAT
GGCAGATGCTGCACGCCCAAAGAAACCGTCACCCGACCCGTCAAGTTCACCTGCGACGGC
GGCTTCAAGTTCAAGAAGCGAATGATGGTGATCAAGTCGTGCTCGTGCCACCGGAAGTGC
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[1-57] 2.2E-6 |
| ProSiteProfiles |
IGFBP-like (IPR000867) - T[1-55] 13.253 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[58-125] 10.162 |
| SMART |
VWF_dom (IPR001007) - T[60-124] 1.5E-6 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[180-240] 1.4E-6 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[189-234] 2.35E-5 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[190-235] 8.491 |
| Pfam |
Glyco_hormone_CN (IPR006208) - T[246-320] 2.0E-5 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[248-320] 13.9 |
| SMART |
Cys_knot_C (IPR006207) - T[253-320] 2.2E-14 |
| ProSitePatterns |
Cys_knot_C (IPR006207) - T[283-320] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTGF_HUMAN | 44.41 % | 261 | 8.93E-86 |
| WISP1_HUMAN | 36.42 % | 196 | 3.51E-60 |
| CYR61_HUMAN | 39.697 % | 202 | 1.39E-62 |