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  1. Transcript 'Cisavi.CG.ENS81.R173...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R173.86210-93663.11988.t

Possible name(s)

NUP50

Gene model

Cisavi.CG.ENS81.R173.86210-93663

Location

R173 [86,404 / 93,663]

Sequences

Amino acid sequence

Length: 468

>Cisavi.CG.ENS81.R173.86210-93663.11988.p
MAKRVADKYLTDQNWEEEDEKEDAGIFTPAGADVLKTRVFKKAKRRVVDKKEVIWVKQFS
LLIFQASPAGAFSGFGGLKPTADTTSSNGFKGFGSTTAFGGSAKFSLFSKKSPTLETGLR
TNPKSPIKDTSPLKRSDAISTKKEKTADLDYNHHLSALNKSVTQWIVDHVEKNPVCDLTP
IFKDYQKHLSDIEDKYGSGSQSDSAVESSPKPQANTPLQPTNKPLQPASAPLQPMSTPLQ
PTSTTLLPTSTTLLPTRTPLQPTSTNDTTIPTSEPVVTSPPVNPLGAFKPNTASPFKGFG
SFGTKPASGGFTGFQFANSMVGSKPVAPDSTQSKTTPDDDYTPPKNETQVVKEDGAFYTK
KCKLFYMKGNSYADKGVGHLHLKPVESSSKTQLIVRADTSLGNLLLNILLNSAMPVGKQG
KNNVSISCIPNPPIDEDEPNKVVPMLIRVKTSDEADELVEILNAKKNE

Nucleotide sequence

Length: 1,787

>Cisavi.CG.ENS81.R173.86210-93663.11988.t
ATGGCGAAGAGAGTAGCCGATAAATACCTCACGGATCAAAACTGGGAGGAAGAAGATGAA
AAAGAGGATGCAGGCATCTTCACCCCTGCTGGAGCCGATGTCCTCAAGACCAGGGTGTTT
AAGAAAGCAAAGAGAAGGGTCGTGGATAAAAAGGAGGTGATTTGGGTTAAACAGTTTAGT
TTACTTATTTTTCAGGCATCACCAGCTGGAGCCTTTTCAGGGTTTGGGGGCTTGAAACCA
ACAGCTGATACAACAAGCTCAAATGGTTTTAAAGGGTTTGGTTCAACCACGGCTTTTGGG
GGATCTGCCAAGTTTTCGCTGTTTTCAAAGAAGTCCCCGACACTGGAAACAGGTTTGCGC
ACAAACCCCAAATCTCCCATTAAAGACACCTCACCACTAAAAAGATCCGATGCTATTTCC
ACAAAAAAAGAGAAAACTGCCGATTTGGATTACAACCACCACCTCAGTGCACTAAACAAG
AGTGTAACTCAATGGATTGTGGATCATGTTGAGAAGAACCCAGTTTGTGATCTGACCCCG
ATATTCAAGGATTACCAGAAGCATTTGAGCGACATTGAGGACAAATATGGTTCCGGGAGT
CAATCTGACTCTGCTGTTGAAAGTTCCCCGAAACCTCAAGCAAACACACCATTGCAACCA
ACCAACAAACCATTGCAACCAGCAAGTGCACCATTGCAACCAATGAGCACACCATTACAA
CCAACCAGCACGACTTTGTTGCCAACAAGCACAACCTTGCTACCAACCAGAACACCATTA
CAACCAACCAGCACAAATGACACCACAATTCCCACCAGCGAACCAGTGGTCACCTCACCC
CCCGTAAACCCGTTGGGTGCTTTCAAACCCAACACAGCCTCACCCTTTAAAGGGTTTGGT
TCGTTTGGCACCAAACCTGCTTCAGGGGGCTTCACGGGATTCCAGTTCGCTAATTCAATG
GTCGGATCGAAACCAGTTGCCCCAGATTCAACCCAATCCAAAACAACCCCCGATGACGAT
TACACTCCACCCAAGAATGAAACTCAAGTTGTTAAGGAAGACGGGGCTTTTTACACCAAA
AAATGCAAGTTGTTCTACATGAAAGGCAACTCGTACGCCGATAAAGGCGTCGGCCATTTG
CATTTGAAACCAGTGGAATCGTCGAGCAAAACGCAGCTCATCGTACGCGCCGACACCTCG
CTCGGCAACTTGCTGCTCAATATTCTGCTTAACTCGGCGATGCCGGTTGGGAAGCAAGGG
AAGAACAACGTCTCCATCTCCTGTATTCCCAACCCTCCTATCGATGAAGATGAACCTAAT
AAGGTCGTCCCCATGTTGATTCGAGTGAAGACTTCGGACGAAGCGGACGAACTTGTGGAG
ATTTTGAACGCAAAGAAAAACGAATGACGACATGCGAATGACGCACTACGCATTACGCAT
ACCGCGCAACTGGTTTACCTCGACGAAATCTGTAAATTACGAAATCATATACGTTTTGGT
GCTGTCTCGTCGTGAGCGGTAAACGGTTATTTGCAAAAAAATTAGGGATTTTTATTTATT
GCAGCAGTTTAATATGACGTGCATTGGCGCAAGACTGTTCTTTGTGCTGATTCTTTGAAT
TTAAAACGGTTTTAAGTTAAATTACCGAAATTAAAGTTGCTTCGTTTAAAAATAATTTTT
TGTATAGGACAATCGAACTTGTGCTATGTGACGTGGCGTGTATGTCCGTTTGTTAAATTC
ACTGAAATCTAGCTTCCAAATACTGCCATTGCTCTTTTCACGTGGCA

InterProScan

Pfam
NUP2/50/61 (IPR015007) - T[2-95] 8.5E-20
Gene3D
PH-like_dom_sf (IPR011993) - T[287-465] 1.1E-27
SMART
Ran_bind_dom (IPR000156) - T[340-462] 9.0E-4
Pfam
Ran_bind_dom (IPR000156) - T[354-465] 1.5E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NUP50_HUMAN 37.885 % 257 9.29E-81