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- Transcript 'Cisavi.CG.ENS81.R172...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R172.33993-46111.19429.t
Possible name(s)
SRP72
Gene model
Location
R172 [34,046 / 46,040]
Amino acid sequence
Length: 679
>Cisavi.CG.ENS81.R172.33993-46111.19429.p
MAAQSPTNMTVLYGELNKFINVSDYKQALKAANKIIHTKEGKEDTEAMHCKAVCMMQMSQ
FAEALKFIEGAPEIKDAYPFSLLVFEKAYCQYRLLQTEDALDTINQVKSPDLRLLELKAQ
VLYKLGQYSASLALYKNLIKEFSDEFEEERMTNISAVHAALSAFDGVKTELGFKVESYEQ
LYNKGCWLLGHNRVVEAQKVLVQAEEVCRGLYVDDPDVPEEEIEGEISIIRVQLAYALQL
QGKTDEALTIYNQVIRLRPTDIALVAVASNNIISINREQNVFDSRKKMKATIAPGLENKL
VPFQKKKIDFNRALLFMYSNQVSDFILSHANIFNPITAYNLLLFLLGGLPETAEVITTRP
QRQHRSMPHSSSSDWKRERLQQSRGILAGLVSKNACLVLEALGDVTYTPAVVSCLVSLYN
AQRGGEVKAARLIERAIEWHKNNKSPAPILSSLMWESSEFALKHNNPKSAAGTLEEILRF
EPKNVKVLAKLIFAYSMFNQTKAHQISENLPSLSDLSVHVDVDDLERNASRLAPRYVKKQ
KDKDVDAKDSSSATALIIKKKRKKKKNPVPKDFRENYHADDERWLPLRERSYYKGRRKDR
KKGGVGKGTQGTHMGASDAYDMSHKTPTHAPNSPKPGSSGSGSHGNTPLNSPKPTQVKGA
KPKKGGAGGKKKKKGKGGW
Nucleotide sequence
Length: 2,044
>Cisavi.CG.ENS81.R172.33993-46111.19429.t
AAAAATGGCGGCCCAAAGCCCAACGAACATGACGGTACTTTACGGCGAACTCAACAAGTT
TATCAATGTGTCCGATTACAAGCAAGCGTTGAAAGCTGCTAATAAAATTATCCACACCAA
GGAAGGCAAAGAAGACACAGAGGCCATGCATTGCAAAGCAGTATGTATGATGCAGATGTC
CCAGTTTGCAGAGGCACTCAAGTTTATTGAGGGAGCCCCAGAAATTAAAGATGCTTATCC
GTTCAGCCTACTTGTATTTGAGAAAGCTTACTGCCAATACCGATTGCTTCAAACTGAAGA
TGCATTGGATACCATCAACCAAGTTAAGAGCCCAGATCTCCGGCTATTGGAGCTTAAAGC
TCAAGTGCTTTACAAGCTTGGCCAGTACAGTGCATCATTAGCTCTCTACAAGAACCTCAT
AAAGGAATTCTCCGATGAATTCGAGGAGGAAAGAATGACGAATATATCAGCCGTGCATGC
TGCTCTGTCAGCTTTCGACGGGGTTAAGACCGAATTGGGATTCAAGGTGGAATCATACGA
GCAGCTGTACAACAAAGGCTGCTGGTTGCTCGGCCACAATCGGGTGGTGGAAGCCCAGAA
GGTCCTGGTGCAAGCTGAGGAAGTTTGCCGGGGTTTGTACGTTGATGATCCTGATGTACC
AGAGGAGGAGATAGAAGGGGAAATTTCGATTATAAGAGTTCAACTGGCGTACGCGTTGCA
ACTGCAAGGCAAGACAGATGAAGCGCTTACCATCTACAATCAGGTCATCCGACTACGGCC
GACCGACATTGCGTTGGTAGCAGTGGCATCTAACAATATCATCAGCATTAATAGGGAGCA
AAACGTTTTCGACTCACGCAAGAAGATGAAAGCCACCATAGCACCAGGACTTGAGAACAA
GTTGGTCCCATTCCAGAAGAAGAAAATCGACTTTAACAGAGCTTTGCTGTTCATGTATTC
CAACCAGGTGAGCGATTTCATTCTTTCCCATGCAAACATCTTTAATCCCATCACTGCATA
TAATCTTTTGCTTTTCCTGTTGGGAGGCTTGCCGGAAACTGCTGAAGTCATTACAACGCG
ACCACAACGACAGCATCGTTCCATGCCTCATTCAAGCAGCTCAGATTGGAAGAGAGAAAG
GCTCCAGCAAAGCCGTGGAATACTTGCAGGTTTGGTAAGCAAAAATGCTTGTCTCGTGCT
AGAGGCGTTAGGAGATGTGACTTACACCCCAGCTGTGGTATCGTGCCTCGTATCGTTGTA
CAACGCGCAGCGTGGAGGTGAGGTGAAGGCGGCTCGGCTGATAGAGCGCGCCATCGAGTG
GCATAAGAACAACAAGAGCCCAGCCCCAATTCTCAGCAGCTTAATGTGGGAGTCGTCTGA
GTTTGCATTGAAACACAACAACCCCAAATCTGCTGCTGGAACCCTTGAGGAAATATTAAG
ATTTGAGCCGAAGAATGTGAAAGTTCTAGCCAAGTTGATTTTCGCTTATTCAATGTTCAA
CCAGACCAAGGCCCATCAAATCAGCGAAAATCTTCCGTCATTGTCCGATCTCTCGGTGCA
CGTAGATGTTGATGACTTGGAGCGGAACGCATCGCGGTTGGCTCCAAGATACGTGAAGAA
ACAGAAGGATAAAGACGTGGATGCGAAGGATTCATCGTCTGCCACCGCCCTTATAATAAA
GAAGAAGCGAAAAAAGAAGAAAAACCCTGTTCCAAAAGATTTCCGAGAGAATTATCATGC
AGATGATGAACGCTGGCTTCCTCTAAGAGAGAGGTCATACTACAAAGGTCGACGAAAGGA
CAGGAAAAAGGGAGGTGTGGGTAAAGGTACCCAGGGAACACATATGGGAGCTTCAGATGC
ATATGATATGTCCCATAAAACCCCAACCCATGCCCCAAACTCACCCAAGCCTGGGTCCAG
TGGTTCAGGAAGTCACGGCAATACCCCTCTTAATTCACCCAAACCCACCCAAGTAAAGGG
GGCCAAACCCAAGAAGGGTGGGGCCGGGGGCAAAAAGAAAAAGAAGGGCAAAGGGGGTTG
GTAA
| PANTHER |
SRP72 (IPR026270) - T[1-676] 3.7E-167 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[1-78] 7.172 - T[228-261] 9.564 |
| PIRSF |
SRP72 (IPR026270) - T[1-679] 5.0E-164 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[6-148] 4.56E-16 - T[202-262] 4.56E-16 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[8-169] 4.7E-47 - T[170-288] 6.7E-6 |
| Pfam |
SRP_TPR-like (IPR031545) - T[39-159] 6.0E-16 |
| SMART |
TPR_repeat (IPR019734) - T[45-78] 470.0 - T[112-145] 49.0 - T[228-261] 0.006 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[228-261] 8.644 - T[451-484] 5.192 |
| Pfam |
TPR_repeat (IPR019734) - T[233-260] 0.0053 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[539-595] 1.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 39.264 % | 400 | 1.54E-130 |