- Transcript 'KH2012:KH.L10.34.v1....' >
- Transcript 'Cisavi.CG.ENS81.R172...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R172.33993-46111.19428.t
Possible name(s)
SRP72
Gene model
Location
R172 [33,992 / 46,111]
Amino acid sequence
Length: 689
>Cisavi.CG.ENS81.R172.33993-46111.19428.p
MAAQSPTNMTVLYGELNKFINVSDYKQALKAANKIIHTKEGKEDTEAMHCKAVCMMQMSQ
FAEALKFIEGAPEIKDLLVFEKAYCQYRLLQTEDALDTINQVKSPDLRLLELKAQVLYKL
GQYSASLALYKNLIKEFSDEFEEERMTNISAVHAALSAFDGVKTELGFKVESYEQLYNKG
CWLLGHNRVVEAQKVLVQAEEVCRGLYVDDPDVPEEEIEGEISIIRVQLAYALQLQGKTD
EALTIYNQVIRLRPTDIALVAVASNNIISINREQNVFDSRKKMKATIAPGLENKLVPFQK
KKIDFNRALLFMYSNQWEACRKLLKSLQRDHNDSIVPCLIQAAQIGREKGSSKAVEYLQK
YISEHSDPDISPEIDLTDVKLCLVQLLLGLGNLEEACLVLEALGDVTYTPAVVSCLVSLY
NAQRGGEVKAARLIERAIEWHKNNKSPAPILSSLMWESSEFALKHNNPKSAAGTLEEILR
FEPKNVKVLAKLIFAYSMFNQTKAHQISENLPSLSDLSVHVDVDDLERNASRLAPRYVKK
QKDKDVDAKDSSSATALVSEGASNTEIIKKKRKKKKNPVPKDFRENYHADDERWLPLRER
SYYKGRRKDRKKGGVGKGTQGTHMGASDAYDMSHKTPTHAPNSPKPGSSGSGSHGNTPLN
SPKPTQVKGAKPKKGGAGGKKKKKGKGGW
Nucleotide sequence
Length: 2,199
>Cisavi.CG.ENS81.R172.33993-46111.19428.t
ATTATCACCTCGATTACCATTACATTTTAAGCAGTGGTTAAGGTAGAGTTAGGTAAAAAT
GGCGGCCCAAAGCCCAACGAACATGACGGTACTTTACGGCGAACTCAACAAGTTTATCAA
TGTGTCCGATTACAAGCAAGCGTTGAAAGCTGCTAATAAAATTATCCACACCAAGGAAGG
CAAAGAAGACACAGAGGCCATGCATTGCAAAGCAGTATGTATGATGCAGATGTCCCAGTT
TGCAGAGGCACTCAAGTTTATTGAGGGAGCCCCAGAAATTAAAGACCTACTTGTATTTGA
GAAAGCTTACTGCCAATACCGATTGCTTCAAACTGAAGATGCATTGGATACCATCAACCA
AGTTAAGAGCCCAGATCTCCGGCTATTGGAGCTTAAAGCTCAAGTGCTTTACAAGCTTGG
CCAGTACAGTGCATCATTAGCTCTCTACAAGAACCTCATAAAGGAATTCTCCGATGAATT
CGAGGAGGAAAGAATGACGAATATATCAGCCGTGCATGCTGCTCTGTCAGCTTTCGACGG
GGTTAAGACCGAATTGGGATTCAAGGTGGAATCATACGAGCAGCTGTACAACAAAGGCTG
CTGGTTGCTCGGCCACAATCGGGTGGTGGAAGCCCAGAAGGTCCTGGTGCAAGCTGAGGA
AGTTTGCCGGGGTTTGTACGTTGATGATCCTGATGTACCAGAGGAGGAGATAGAAGGGGA
AATTTCGATTATAAGAGTTCAACTGGCGTACGCGTTGCAACTGCAAGGCAAGACAGATGA
AGCGCTTACCATCTACAATCAGGTCATCCGACTACGGCCGACCGACATTGCGTTGGTAGC
AGTGGCATCTAACAATATCATCAGCATTAATAGGGAGCAAAACGTTTTCGACTCACGCAA
GAAGATGAAAGCCACCATAGCACCAGGACTTGAGAACAAGTTGGTCCCATTCCAGAAGAA
GAAAATCGACTTTAACAGAGCTTTGCTGTTCATGTATTCCAACCAGTGGGAGGCTTGCCG
GAAACTGCTGAAGTCATTACAACGCGACCACAACGACAGCATCGTTCCATGCCTCATTCA
AGCAGCTCAGATTGGAAGAGAGAAAGGCTCCAGCAAAGCCGTGGAATACTTGCAGAAATA
TATTTCTGAGCACTCTGACCCAGACATATCACCCGAGATCGACTTGACCGATGTCAAATT
GTGTTTGGTGCAACTCTTACTCGGGCTTGGAAATCTGGAGGAGGCTTGTCTCGTGCTAGA
GGCGTTAGGAGATGTGACTTACACCCCAGCTGTGGTATCGTGCCTCGTATCGTTGTACAA
CGCGCAGCGTGGAGGTGAGGTGAAGGCGGCTCGGCTGATAGAGCGCGCCATCGAGTGGCA
TAAGAACAACAAGAGCCCAGCCCCAATTCTCAGCAGCTTAATGTGGGAGTCGTCTGAGTT
TGCATTGAAACACAACAACCCCAAATCTGCTGCTGGAACCCTTGAGGAAATATTAAGATT
TGAGCCGAAGAATGTGAAAGTTCTAGCCAAGTTGATTTTCGCTTATTCAATGTTCAACCA
GACCAAGGCCCATCAAATCAGCGAAAATCTTCCGTCATTGTCCGATCTCTCGGTGCACGT
AGATGTTGATGACTTGGAGCGGAACGCATCGCGGTTGGCTCCAAGATACGTGAAGAAACA
GAAGGATAAAGACGTGGATGCGAAGGATTCATCGTCTGCCACCGCCCTTGTGTCTGAGGG
AGCTTCTAACACGGAGATAATAAAGAAGAAGCGAAAAAAGAAGAAAAACCCTGTTCCAAA
AGATTTCCGAGAGAATTATCATGCAGATGATGAACGCTGGCTTCCTCTAAGAGAGAGGTC
ATACTACAAAGGTCGACGAAAGGACAGGAAAAAGGGAGGTGTGGGTAAAGGTACCCAGGG
AACACATATGGGAGCTTCAGATGCATATGATATGTCCCATAAAACCCCAACCCATGCCCC
AAACTCACCCAAGCCTGGGTCCAGTGGTTCAGGAAGTCACGGCAATACCCCTCTTAATTC
ACCCAAACCCACCCAAGTAAAGGGGGCCAAACCCAAGAAGGGTGGGGCCGGGGGCAAAAA
GAAAAAGAAGGGCAAAGGGGGTTGGTAAATCGTGCAATTTTAAGGATCAAGGTTTTTGAG
TGATCTCGCTGATGAATGGAATAAAATTTGTGAAAGAAA
| PANTHER |
SRP72 (IPR026270) - T[1-686] 4.4E-195 |
| PIRSF |
SRP72 (IPR026270) - T[1-689] 3.7E-180 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[8-166] 6.6E-47 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[14-76] 1.69E-12 - T[105-144] 1.69E-12 - T[168-265] 2.13E-7 - T[227-256] 1.69E-12 - T[335-501] 1.69E-12 |
| Pfam |
SRP_TPR-like (IPR031545) - T[39-154] 4.6E-18 |
| SMART |
TPR_repeat (IPR019734) - T[107-140] 49.0 - T[223-256] 0.006 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[223-256] 8.644 - T[452-485] 5.192 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[223-256] 9.564 |
| Pfam |
TPR_repeat (IPR019734) - T[228-255] 0.0054 |
| Pfam |
Signal_recog_part_SRP72_RNA-bd (IPR013699) - T[550-605] 3.3E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRP72_HUMAN | 41.353 % | 465 | 1.48E-155 |