Aniseed - Transcript Card

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R17.1330543-1333416.13155.t

Possible name(s)

SMG6; SWT1

Gene model

Cisavi.CG.ENS81.R17.1330543-1333416

Location

R17 [1,330,542 / 1,333,416]

Sequences

Amino acid sequence

Length: 264

>Cisavi.CG.ENS81.R17.1330543-1333416.13155.p
MEQPLLAFKQGRYVALVRQEDQIESSPQITSYNQDLILPDLPDVDTSFEEQVDSEDEFSE
LKAYRDSLQKTRDVHEKRRNQIQASLDAAGSGSKTMYITPKSVIPDTNCFIDHLDMISDL
LENGQFTVCVCLVVLSELEGLALESKGNTEHNRRVHASAVSSMQFIKQKFTSRHSALCAL
TNQGSALDTISFRSQNSYSDKGSNDDLILQCCEKYEERTKNSSFPNTSSTVLLTDDRNLR
VKALTRNMPTKSLPEFWKWISVAK

Nucleotide sequence

Length: 894

>Cisavi.CG.ENS81.R17.1330543-1333416.13155.t
GGGATGGAGCAACCTCTGCTGGCATTTAAACAAGGGAGGTATGTTGCGTTAGTGAGGCAG
GAAGACCAGATTGAATCTTCACCTCAAATCACCAGTTATAACCAAGATCTGATCCTTCCT
GATCTTCCCGATGTTGACACAAGTTTTGAGGAGCAAGTGGACTCCGAGGATGAGTTTTCC
GAGCTCAAAGCATATCGGGACTCGCTCCAGAAGACTAGAGATGTCCATGAAAAGAGAAGA
AATCAAATTCAGGCATCACTGGATGCTGCAGGATCAGGGAGCAAGACAATGTACATCACT
CCGAAGAGTGTGATCCCGGACACGAATTGCTTCATAGACCATCTTGATATGATTAGCGAT
CTTTTGGAGAACGGCCAGTTCACCGTCTGCGTTTGCCTCGTTGTATTATCAGAGTTGGAG
GGTCTTGCCCTAGAGAGCAAGGGTAACACAGAGCACAACAGACGTGTTCACGCATCCGCT
GTGTCATCGATGCAGTTCATCAAGCAGAAATTCACATCGCGACACAGCGCCTTATGTGCT
CTTACCAACCAAGGCTCGGCACTTGATACTATTTCATTCAGGAGCCAAAACTCTTACAGT
GATAAGGGCAGCAATGATGATCTGATACTGCAGTGTTGTGAAAAATATGAAGAGCGAACA
AAAAATTCTTCCTTCCCCAACACTTCTTCAACTGTTCTTCTCACCGACGATCGAAATTTA
CGAGTCAAAGCGCTCACCCGGAACATGCCCACAAAATCTTTGCCAGAATTTTGGAAATGG
ATTTCTGTTGCTAAGTGAATCTCTTAGTGTCTCGGTGTCGCTTTTTTATTTTTTAGGCTG
TTGTTTTTTAATTAATCGTACTTCTCCATTTGGTTTTAACCTTATCCTAATGCT

InterProScan

SUPERFAMILY	PIN-like_dom_sf (IPR029060) - T[100-165] 1.08E-12 - T[198-257] 1.08E-12
SMART	PIN_dom (IPR002716) - T[101-241] 1.3E-9
Pfam	PIN_dom (IPR002716) - T[104-252] 1.0E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
EST1A_HUMAN	37.943 %	165	3.24E-46