- Transcript 'KH2012:KH.C12.14.v1....' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.5020708-5021676.20050.t
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
R16 [5,020,707 / 5,021,676]
Amino acid sequence
Length: 183
>Cisavi.CG.ENS81.R16.5020708-5021676.20050.p
LWDSFSAAQTEMIITKTGRRMFPGYRVKMSGMDPNAQYCVLMDISSVDENRYKFQHGEWV
IAGRGEPHIPQRFYLHPNSPCTGQQWMKDIVSFHKVKLTNSCGNCGDGKFLVHSMHRYQP
RVHIVRTDDVNTLHLQPMSTFAFPQTFFTTVTAYQNGKIAKLKISNNPYARGFREDGAKS
MKA
Nucleotide sequence
Length: 790
>Cisavi.CG.ENS81.R16.5020708-5021676.20050.t
AAGCAACGAAGATTCTAGAACATTGAAAGAAGAGGATGAATATTGCAAATTCAAACCATC
AAGAGATGAGCTCACGATACGGACCGCAAGTTCATCTTCACGATGTTCAGTTATGGGACA
GTTTCTCAGCTGCTCAGACTGAAATGATTATTACTAAAACCGGAAGGCGAATGTTCCCTG
GTTACCGAGTTAAAATGTCCGGGATGGACCCGAACGCTCAGTATTGCGTATTGATGGACA
TTTCGAGTGTGGATGAAAACAGATACAAGTTTCAACACGGGGAGTGGGTGATAGCTGGTC
GTGGAGAACCACATATCCCACAAAGATTTTATTTGCACCCGAACTCACCTTGTACCGGAC
AACAATGGATGAAAGATATCGTTTCTTTCCACAAAGTTAAATTAACCAACTCTTGTGGGA
ATTGTGGAGACGGAAAGTTCCTCGTACATTCCATGCATCGATATCAACCTCGTGTTCATA
TTGTTCGAACTGATGACGTCAATACGTTACATCTTCAACCGATGTCAACTTTCGCTTTCC
CACAAACTTTCTTTACAACAGTCACAGCATACCAGAACGGAAAGATCGCTAAGTTAAAGA
TATCCAACAACCCTTACGCCCGAGGCTTTCGAGAAGACGGAGCGAAGAGTATGAAAGCGA
AATCGACACTTGCGTCATTTACTCGACCTGTATCAACCACCCACAAGCGAAGATGCTCTC
CAAACACCACTTCCCCGAATTCCACAAAACGAGTGAAACTTGATTACGCACCAGCAGTAT
ACGACCACCA
| SMART |
TF_T-box (IPR001699) - T[1-180] 2.1E-92 |
| Gene3D |
T-box_sf (IPR036960) - T[1-180] 1.4E-77 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-175] 68.367 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-175] 1.62E-69 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[1-20] . - T[75-93] . |
| Pfam |
TF_T-box (IPR001699) - T[1-175] 7.6E-72 |
| CDD |
TF_T-box (IPR001699) - T[1-177] 3.08788E-106 |
| PANTHER |
TF_T-box (IPR001699) - T[1-181] 8.0E-118 |
| PRINTS |
TF_T-box (IPR001699) - T[9-33] 1.7E-40 - T[74-87] 1.7E-40 - T[91-100] 1.7E-40 - T[111-125] 1.7E-40 - T[146-159] 1.7E-40 - T[167-175] 1.7E-40 |
| PRINTS |
TF_Brachyury (IPR002070) - T[54-74] 2.7E-6 - T[116-133] 2.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 52.542 % | 207 | 5.11E-66 |
| TBX2_HUMAN | 52.542 % | 211 | 5.32E-65 |
| TBX3_HUMAN | 48.469 % | 206 | 7.12E-63 |