- Transcript 'KH2012:KH.L20.19.v1....' >
- EST 'FK176431.1' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4322058-4332854.19778.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
R16 [4,322,099 / 4,324,299]
Amino acid sequence
Length: 450
>Cisavi.CG.ENS81.R16.4322058-4332854.19778.p
QRECISIHVGQAGVQIGNACWELFCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSIDYGKKSKLEFAIYPAPQISTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAVYDICRRNLDIERPTYTNLNRLMGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEDEDEGEE
Nucleotide sequence
Length: 1,683
>Cisavi.CG.ENS81.R16.4322058-4332854.19778.t
CAGCGAGAATGTATCTCTATCCACGTCGGTCAAGCCGGAGTCCAGATTGGTAACGCCTGC
TGGGAACTGTTCTGTCTAGAACACGGCATCCAACCCGATGGTCAGATGCCAAGTGACAAG
ACCATTGGAGGAGGGGACGACTCCTTCAACACCTTCTTCAGCGAGACTGGAGCTGGAAAG
CACGTCCCAAGAGCCGTTTTCGTCGATCTTGAACCAACTGTTGTCGATGAGGTCCGAACC
GGTACTTACCGCCAACTCTTCCACCCGGAACAGTTGATTACCGGCAAAGAGGATGCCGCC
AACAACTATGCCCGTGGTCACTACACCATCGGTAAAGAAATCGTTGACCTTGTGCTCGAC
CGAATCCGCAAGTTGGCGGATCAGTGCACTGGTCTCCAAGGTTTCCTCATCTTCCACTCC
TTCGGAGGAGGCACCGGGTCCGGTTTCACCTCTCTTCTCATGGAGAGACTCTCCATAGAT
TACGGCAAAAAATCTAAATTGGAGTTCGCCATTTACCCAGCTCCTCAGATCTCAACCGCT
GTTGTTGAGCCATACAACTCCATCCTCACCACTCACACCACCCTCGAGCATTCCGACTGT
GCTTTCATGGTCGACAACGAGGCCGTCTACGACATCTGCCGACGAAACTTGGACATTGAA
CGCCCAACTTACACCAACTTGAACAGGTTGATGGGACAAATCGTGTCCTCCATCACCGCT
TCGTTGAGATTCGATGGTGCCCTTAACGTCGATTTAACAGAGTTTCAGACGAACTTGGTG
CCATACCCACGTATTCATTTTCCTCTTGCTACCTACGCCCCTGTGATCTCGGCCGAGAAG
GCTTACCACGAGCAACTCTCCGTTTCCGAGATCACCAACGCTTGCTTCGAGCCAGCCAAC
CAGATGGTGAAATGCGACCCACGTCACGGAAAATACATGGCATGCTGCATGCTGTACCGT
GGTGATGTTGTGCCAAAAGATGTCAATGCCGCCATTGCAACCATCAAGACCAAGAGAACC
ATCCAATTCGTCGACTGGTGCCCAACTGGTTTCAAGGTCGGTATCAACTACCAACCACCA
ACTGTTGTACCAGGTGGTGACTTGGCCAAGGTTCAACGCGCCGTTTGCATGTTGAGCAAC
ACAACCGCCATCGCTGAGGCTTGGGCTCGTCTTGACCACAAGTTTGACTTGATGTACGCC
AAGCGAGCTTTCGTGCATTGGTACGTCGGTGAGGGTATGGAAGAGGGAGAATTCTCCGAG
GCCCGTGAGGATTTGGCCGCCCTTGAGAAGGATTACGAAGAGGTTGGAGTCGACTCCGTT
GAGGCTGAGGACGAAGACGAGGGCGAGGAATATTAAACTCCCGTCCGTCAAATACTCCCC
ATCGAATATATCTCTATTTAATTTGTGTTTTGGGGGATTTGGTGCTTCGGCTACATAATA
AAGTACTCAGTAACCACATAATTTTATTAACATAATTAAAACCTTGGAAGCAGAAACGAT
AACGAAAACCAGCACATTTAATTTTAAATAAGCCAATATTTTGTTTTTTTTAAAAAGTAT
TTTAAACTGCCCTGTATAATTTAATTACACAATAAACAAATTTCAATTTTATTATTGAAC
CAATGTTTTATAACTCTTTGATTGTGTGGTTAATTGTCCGGCCAAATAGCTTGGTGGATT
AAT
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-268] 4.5E-130 |
| PANTHER |
Tubulin (IPR000217) - T[2-447] 0.0 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-244] 3.4E-99 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[3-213] 1.0E-67 |
| PRINTS |
Tubulin (IPR000217) - T[10-30] 2.7E-90 - T[53-72] 2.7E-90 - T[95-106] 2.7E-90 - T[108-132] 2.7E-90 - T[134-152] 2.7E-90 - T[153-174] 2.7E-90 - T[178-191] 2.7E-90 - T[192-212] 2.7E-90 - T[380-408] 2.7E-90 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[18-33] 3.0E-120 - T[45-58] 3.0E-120 - T[88-101] 3.0E-120 - T[120-128] 3.0E-120 - T[148-160] 3.0E-120 - T[161-172] 3.0E-120 - T[214-226] 3.0E-120 - T[274-289] 3.0E-120 - T[321-342] 3.0E-120 - T[347-360] 3.0E-120 - T[360-379] 3.0E-120 - T[385-401] 3.0E-120 - T[422-438] 3.0E-120 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[49-246] 4.1E-80 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[142-148] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[246-437] 7.02E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[248-393] 1.4E-59 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[263-391] 2.9E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[269-383] 7.6E-68 |
| Gene3D |
Tubulin_C (IPR023123) - T[384-450] 1.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 96.659 % | 923 | 0 |
| TBA3C_HUMAN | 97.773 % | 920 | 0 |
| TBA3D_HUMAN | 97.773 % | 920 | 0 |