- Transcript 'Cisavi.CG.ENS81.R16....' >
- Clone 'AHC0AAA224YJ07' >
- Clone 'AHC0AAA202YE10' >
- Clone 'AHC0AAA234YB23' >
- Transcript 'Cisavi.CG.ENS81.R16....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R16.4290170-4298661.19766.t
Possible name(s)
SELE; SELP; SVEP1
Gene model
Location
R16 [4,290,169 / 4,298,661]
Amino acid sequence
Length: 536
>Cisavi.CG.ENS81.R16.4290170-4298661.19766.p
MKRAANAHSNAMPDIDWREQQFLLVKKTCYGTRRAPVCRQHVCEPRLMVPNNGRKTCSKA
NYAGSQCNFTCNTGYRMEGSSHSMCQDDQTWSHSAPECRPILCFPPHVAPTNGAIRCTNE
NVLGSKCRFMCDKDYAVVGPKASFCKKSYYRKDDSNGEWSTLPATCQKITCTPDMVAPQY
GRIDCTDGSNAGSRCTFYCNSGYSMIGSMYTACLNEIGTLTGVWQNPAPVCRPIQCDPRL
ENPERGQVSCLNGVELGSMCRFTCDYGNVLLGSGQTTCTDDGNGDVIGVWSAPPSRCEPI
VCLPLHEAPTNGFVSCTNDAFLGSVCEFSCDDSYKLIGNPICSCTMGSDGGLVGRWSDYA
PVCLRKSCPAQLLDPMNGQTICTDAIFLGSECEFTCHDNHMRVGPLYSNCIELEDGSVVW
DRPVPKCEPIKCPDQFPLAHGEMTCSKSNFATSRCQFRCTADNYQLYPPTTENHCLNTSN
WDVPKPCCARPCPPFAVMDFVVVHLHPFTRRKSVLGVSLQQRSRHSFPDLVARPPN
Nucleotide sequence
Length: 2,713
>Cisavi.CG.ENS81.R16.4290170-4298661.19766.t
GGAACATCGAATTGAGAAACATGAAGATCGTATCTATAATTTGTTTAGTTGCGAGTCTTG
CATACTCTTCAGCAATCAGGTGTTGGGAGTGCAACAACGTATTCTCGAACGAGGAATGTC
TGACAACTGGAAAACTCGTCCGATGCCAAGCTAATCAGGACGCTTGTCAAATCGAGTTGC
GTCACGGTGGTTGGGGACCGAGGGTGATGATATCAAAACGATGTAAACAATCTCAAGCTT
GTGAGAATAACTTCATTCAGAACCCTCAAACTGCGTGGGAATTCACCCAATGCAATCTAC
GAGTTCCGTCTTCTGTGTGTCGATGCTGCTGCAAAGGGGATGAATGTAATAAAGGGAGTC
TCAGTTGCTGGAGTGACACCAAAGCATTGAAATGTGAGCCTGGACACACAACTCCACGCA
ACGGACGTTTGGTGTGCACGAATGTGAATGAAGAGGGCAGCCAATGCACATTCGAATGCA
ATGCCGGATATCGATTGGAGGGAGCAGCAGTTTCTACTTGTCAAAAAGACTTGCTATGGG
ACGAGAAGGGCACCAGTGTGCCGACAACATGTCTGTGAACCGCGTCTCATGGTCCCCAAT
AACGGACGCAAAACATGTAGCAAGGCAAACTACGCTGGAAGCCAGTGCAACTTTACATGT
AACACTGGGTACAGAATGGAAGGCAGTTCGCATTCCATGTGCCAAGATGATCAGACATGG
AGCCACTCAGCACCAGAATGCCGCCCGATCCTTTGTTTTCCACCTCATGTGGCGCCCACT
AATGGAGCAATCAGATGCACAAACGAAAATGTCCTCGGGAGCAAATGCCGCTTCATGTGT
GACAAGGATTACGCTGTGGTTGGGCCCAAAGCTTCCTTCTGTAAGAAGTCGTACTACAGA
AAAGATGACAGTAATGGCGAGTGGTCAACTCTTCCAGCAACTTGTCAAAAAATTACATGC
ACACCTGACATGGTTGCACCTCAATACGGACGAATCGATTGCACAGATGGTTCCAATGCG
GGCAGTCGGTGCACCTTCTACTGCAATAGTGGATACAGTATGATCGGTAGCATGTACACA
GCTTGTTTGAATGAAATCGGGACATTAACTGGAGTATGGCAGAACCCAGCACCCGTTTGT
AGACCAATCCAGTGTGATCCACGACTAGAGAATCCCGAAAGAGGACAAGTTTCATGCTTA
AATGGTGTCGAACTTGGCTCGATGTGCCGCTTCACTTGTGACTACGGAAACGTGTTGTTG
GGTTCGGGGCAGACCACCTGCACTGATGATGGAAATGGTGATGTCATCGGGGTTTGGAGT
GCCCCACCATCCAGATGCGAACCAATTGTGTGTCTTCCCCTTCACGAGGCCCCCACCAAC
GGGTTCGTCAGCTGCACAAATGACGCTTTCTTGGGCAGTGTGTGTGAATTCTCTTGTGAC
GATAGTTATAAGTTGATCGGAAACCCCATATGTTCATGCACAATGGGCAGTGATGGTGGT
CTGGTCGGACGCTGGAGTGATTACGCGCCTGTTTGTCTGCGAAAATCATGTCCCGCCCAG
CTGTTGGACCCTATGAACGGGCAGACTATCTGCACCGACGCGATTTTCCTTGGTTCCGAG
TGCGAATTCACCTGCCATGACAACCATATGCGTGTGGGACCACTCTACAGCAACTGCATT
GAACTTGAGGATGGTTCAGTGGTGTGGGATCGGCCAGTGCCAAAGTGTGAACCAATTAAA
TGCCCGGATCAATTCCCTCTTGCTCATGGAGAGATGACCTGCTCAAAGAGCAACTTCGCC
ACCTCACGATGCCAATTCCGATGCACTGCTGATAACTACCAGTTATATCCCCCTACCACA
GAGAACCACTGCTTGAACACATCGAACTGGGATGTGCCGAAGCCGTGCTGTGCAAGGCCG
TGTCCTCCATTCGCTGTGATGGACTTCGTTGTTGTCCACCTTCACCCTTTCACCCGAAGG
AAGTCAGTACTCGGTGTTTCGCTACAACAGAGAAGTCGACACTCATTCCCAGATCTTGTT
GCAAGACCACCAAACTAACATGGACGACTTCATGTATGCATTTGACGACATTCCCTATGA
TGGTTCAGGCACACACACTGGAAATGCGATCAACCACGTTGTCGACTATATTCTTGCCCC
GGGTAAGGGGAACCGTCCCAACGCACAGGATATCGTGTTGCTTATAACTGATGGAAGATC
TCAGGATTCAGTTCGACGGCCCGCTCAACGACTTCGACAGACTGGTGCCACAGTGTTTGT
ACTTCCAATCTTGCCACCACGTGGACGGCTGGATATGGCTCAAGTACGAGAGATCGCTGG
GCGCGAGGAAAATATCATCACCGACGCGATTGAGGGAGGGTTCGAGGCACTCACAGCACA
ATTCTCCAAGAAAGTCGGCGACATGATCTGCAGGAACCCATGCAAGCACACTCTGCATGA
CCATCTTGCTTTGTAATGTCACAGTCGACGTTTATTAAATTGTTGTGATGTTAAAACCAG
TACCAAGTATAACCAGTGTTGTTTGTATTCCATATTGATTTGTGCCTACATAATTTATTC
GTGTGAAGTGTTACTAAATGGTATTCCTTTCATGTATGCCATATTGTGTTTTAATTTATT
CCTATTTATTGTTAAATAACAAAATTTTCTTTTGTGCCACTGATTACAATTAAACACACG
GTACAAATTTTTT
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[41-100] 9.95 - T[101-168] 8.178 - T[169-233] 8.852 - T[234-299] 8.085 - T[300-365] 8.209 - T[366-429] 7.588 - T[430-490] 7.298 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[43-98] 2.0E-11 - T[103-166] 7.8E-6 - T[171-231] 4.5E-6 - T[236-297] 1.9E-6 - T[302-363] 3.1E-8 - T[368-427] 1.4E-5 - T[432-488] 2.8 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[45-99] 1.74826E-11 - T[105-167] 7.25737E-6 - T[173-232] 9.04462E-7 - T[238-298] 9.97765E-7 - T[304-363] 2.5613E-6 - T[368-428] 3.68096E-4 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[46-108] 9.59E-14 - T[107-173] 1.0E-8 - T[175-239] 4.45E-11 - T[240-305] 4.73E-11 - T[307-370] 3.06E-11 - T[374-441] 9.59E-11 - T[427-491] 1.53E-5 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[51-98] 4.4E-9 - T[106-166] 0.0029 - T[178-231] 2.7E-5 - T[239-297] 0.0012 - T[309-363] 2.0E-4 - T[374-427] 0.002 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SVEP1_HUMAN | 25.4 % | 123 | 1.79E-29 |
| LYAM3_HUMAN | 30.123 % | 164 | 4.45E-43 |
| LYAM2_HUMAN | 27.805 % | 124 | 3.39E-30 |