Aniseed - Transcript Card

Transcript 'Cisavi.CG.ENS81.R1.6...'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R1.6281347-6291559.20308.t

Possible name(s)

ASPSCR1; UBXN6

Gene model

Cisavi.CG.ENS81.R1.6281347-6291559

Location

R1 [6,281,346 / 6,291,559]

Sequences

Amino acid sequence

Length: 256

>Cisavi.CG.ENS81.R1.6281347-6291559.20308.p
TKAQKKFSLPLRLYHATLTIFLLTRAKKNIKRFEKTTKFFSEKVSSVEGAEEFLEVVGFN
RTIGENDEIYFVFGNTDIESLKSAKETLQTTERLQVKIHRDKKILLINDRPPAAIKLSND
FFKLTSQEVKQEQVARTEEIELNKQLRTKAMRQGTRTSQTSRYTIIRIKFPDAKILQGTF
RASETVKDLNEFIRENINVDWAMFVLKTSLGQIISDETSTLQDADLVPTALLNLVWNEEI
RLQVKGQQHIDLSLKS

Nucleotide sequence

Length: 1,412

>Cisavi.CG.ENS81.R1.6281347-6291559.20308.t
AGTAGAACTGTTTGTTTACTGCTGATTTGCGATTGGTTTAAGGTGAATTTATTTTAACTG
GTAGAGTTAAGAAATCTCAAGTTTGCACAAAGGGAAGGTTAACTACGGTATTAATCGGTA
CCTAATTTCGAAATCACAATGAAGAAAATTTTCACCAAAATAAAGACGGATATAAAGTTT
GCCCGTGCAGGGGAAGGACACAAATTTAATATTACAGAACTAGACCTGCAGAGTCCGGCC
CCTCCCAACCCCATGTTCGAAACCAACCCTTATCATCATCTCAGATCAATGCTGGGTCAG
CAGCACTTGCACGTCATGAAGAAAAGTCACGCCAAACGAAAACAGTCGTGCCCAAAGTGA
TCAAAAGCAGGCCAGCAAAGGAAGACGGCCCATCTGAGAATACCCAGCAGGAGGAGTTCA
CTTTCAGCGACTCCTCGTTCAGCAGTGGAAAGCACAGTTTGCTTTATATCACCTTTTACT
GACGAAGTCGTGAAAAAAGCGGACCTCCAAAACCACATTAGAGAGCACTTAATTATGAGA
TTATGTGATCACGGGGCTATGGCTGCAGTTCAGATGATGAAGACATTAAACAAAAGCCCA
GAAAAAGTTCAGTTTGCCTCTGAGACTATATCACGCTACATTGACAATATTCTTGCTCAC
CCGGGCGAAGAAAAATATCAAAAGATTCGAAAAAACAACAAAGTTTTTCAGCGAGAAAGT
TTCCTCTGTAGAAGGAGCTGAGGAGTTTCTAGAAGTTGTTGGTTTCAATCGAACGATCGG
GGAAAACGATGAGATTTATTTTGTGTTTGGAAACACTGACATAGAGTCGCTAAAAAGTGC
GAAGGAAACACTGCAAACCACAGAGCGACTACAAGTTAAAATTCACCGCGATAAAAAGAT
TTTGCTGATTAACGATCGCCCTCCTGCCGCTATCAAGCTTTCCAATGATTTCTTTAAACT
AACCTCCCAGGAAGTAAAACAGGAGCAGGTAGCAAGAACAGAAGAGATTGAATTAAACAA
ACAACTACGAACCAAAGCGATGAGGCAAGGCACTCGGACGAGCCAAACTTCCCGTTATAC
CATTATAAGAATCAAGTTTCCAGACGCAAAAATTTTACAAGGCACCTTCCGTGCGAGTGA
AACCGTAAAAGATTTAAACGAATTTATCCGAGAGAATATCAATGTTGATTGGGCGATGTT
CGTTTTGAAAACTTCCCTCGGGCAAATTATTTCGGACGAGACTTCCACTTTACAAGATGC
CGATCTGGTGCCGACAGCTTTATTAAACCTGGTTTGGAATGAAGAGATCAGACTGCAGGT
GAAAGGTCAGCAGCATATTGATCTGTCGTTGAAAAGTTGATGCGGTATTCCCTGTGTTAC
CGGTGCTATAATAAATTATTGTCTGGGCAAAA

InterProScan

Pfam	PUB_domain (IPR018997) - T[30-85] 2.8E-7
SUPERFAMILY	PUB-like_dom_sf (IPR036339) - T[31-97] 5.62E-8
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[131-235] 3.97E-15
ProSiteProfiles	UBX_dom (IPR001012) - T[159-234] 13.957
Pfam	UBX_dom (IPR001012) - T[161-232] 9.2E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UBXN6_HUMAN	36.792 %	132	4.52E-36